DRSC/TRiP Functional Genomics Resources

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Protein Alignment Polr1H and MED26

DIOPT Version :10

Sequence 1:NP_524439.1 Gene:Polr1H / 42563 FlyBaseID:FBgn0038903 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_004822.2 Gene:MED26 / 9441 HGNCID:2376 Length:600 Species:Homo sapiens


Alignment Length:28 Identity:8/28 - (28%)
Similarity:13/28 - (46%) Gaps:0/28 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NRTKRESESDADGPVVERKCPKCNHDKM 89
            :|.:|..:.|...|....|..|.:||.:
Human   146 SRKRRGDQRDLGHPGPPPKVSKASHDPL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Polr1HNP_524439.1 RPB9 10..115 CDD:441202 8/28 (29%)
Zn-ribbon_RPA12 73..119 CDD:259792 5/17 (29%)
MED26NP_004822.2 TFS2N 12..86 CDD:197766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..330 8/28 (29%)
Med26_M 177..417 CDD:464807
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..402
Med26_C 419..598 CDD:464806
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 431..461
Blue background indicates that the domain is not in the aligned region.

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