DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpI12 and Tceanc2

DIOPT Version :9

Sequence 1:NP_524439.1 Gene:RpI12 / 42563 FlyBaseID:FBgn0038903 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_079893.1 Gene:Tceanc2 / 66526 MGIID:1913776 Length:207 Species:Mus musculus


Alignment Length:54 Identity:15/54 - (27%)
Similarity:21/54 - (38%) Gaps:12/54 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DP------SKVFNRTKRESESDADGPVVE-RKCPKC-----NHDKMSYATLQLR 97
            ||      .:|:...|...|...|.|.:| |..||.     |..|:....|:|:
Mouse    92 DPEVAGLAKEVYTEWKTFIEKHLDRPSIEVRSDPKTESFRKNAQKLLSEALELK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpI12NP_524439.1 RPB9 10..119 CDD:224510 15/54 (28%)
Zn-ribbon_RPA12 73..119 CDD:259792 10/31 (32%)
Tceanc2NP_079893.1 TFIIS_I 38..111 CDD:238107 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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