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Protein Alignment Polr1H and Polr1h

DIOPT Version :10

Sequence 1:	NP_524439.1	Gene:	Polr1H / 42563	FlyBaseID:	FBgn0038903	Length:	120	Species:	Drosophila melanogaster
Sequence 2:	NP_075651.1	Gene:	Polr1h / 66136	MGIID:	1913386	Length:	123	Species:	Mus musculus

Alignment Length:	117	Identity:	50/117 - (42%)
Similarity:	67/117 - (57%)	Gaps:	15/117 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 FCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTIHFNTYDPSKVFNR------TKRES 68
            |||.|||:||...::..|||..|  .|..||...|.       .....|.|||:      ...:.
Mouse    16 FCPDCGSVLPLPGIQDTVICSRC--GFSIDVRDCEG-------KVVKTSVVFNKLGATIPLSVDE 71

  Fly    69 ESDADGPVVERKCPKCNHDKMSYATLQLRSADEGQTVFFTCLKCKFKESENS 120
            ..:..|||::|:||:|.|:.|:|.|.|:||||||||||:||:.|||:|.|:|
Mouse    72 GPELQGPVIDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCINCKFQEKEDS 123

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.