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Protein Alignment RpI12 and Polr2i
DIOPT Version :9
Sequence 1: | NP_524439.1 |
Gene: | RpI12 / 42563 |
FlyBaseID: | FBgn0038903 |
Length: | 120 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099714.1 |
Gene: | Polr2i / 292778 |
RGDID: | 1309395 |
Length: | 125 |
Species: | Rattus norvegicus |
Alignment Length: | 118 |
Identity: | 27/118 - (22%) |
Similarity: | 43/118 - (36%) |
Gaps: | 28/118 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 PG-----FCPSCGSILPELQVKGNVI----CYNCKKEFQPDVYSGEKSEFTIHFNTYDPSKVFNR 63
|| ||..|.::|...:.|.|.| |.||. |..|.....|:.| |:.:.
Rat 9 PGFVGIRFCQECNNMLYPKEDKENRILLYACRNCD-------YQQEADNSCIYVN-----KITHE 61
Fly 64 TKRESESDAD---GPVVER----KCPKCNHDKMSYATLQLRSADEGQTVFFTC 109
....::..|| .|.:.| .|.||.|.:..:.......|::...:::.|
Rat 62 VDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVC 114
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1594 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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