DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6800 and cdc2

DIOPT Version :10

Sequence 1:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001342995.1 Gene:cdc2 / 2539869 PomBaseID:SPBC11B10.09 Length:297 Species:Schizosaccharomyces pombe


Alignment Length:297 Identity:109/297 - (36%)
Similarity:165/297 - (55%) Gaps:36/297 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKMLEKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKFGNIALNTLREIKTLQLCKSE----YIL 69
            |:.:||||||.:|.|:||......:.||:||:.|:::...:....:|||..|:....|    ..:
pombe     4 YQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRSNCV 68

  Fly    70 DIIDIYPDLTGLSLVLEYQPDTLYNRLKSEVNPLSR--------QQVRKFAHQMFKGIAYLHEAG 126
            .::||....:.|.||.|:    |...||..::.:|.        :.|:||.:|:..|:.:.|...
pombe    69 RLLDILHAESKLYLVFEF----LDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRR 129

  Fly   127 LMHRDIKPANLLISDTDMLKIADFGLARLY-FPEDESRLYSPQVSTRWYRAPEILFGSQKYGTGV 190
            ::|||:||.||||.....||:|||||||.: .|   .|.|:.::.|.||||||:|.||:.|.|||
pombe   130 IIHRDLKPQNLLIDKEGNLKLADFGLARSFGVP---LRNYTHEIVTLWYRAPEVLLGSRHYSTGV 191

  Fly   191 DMWAAGCVVAEMLRGVPLFAGTTDIEQLAIIIRTLGSPRLNQWPELTSLPDYSKIRFPNSVGIHW 255
            |:|:.||:.|||:|..|||.|.::|:::..|.:.||:|....||.:|.|.|| |..||     .|
pombe   192 DIWSVGCIFAEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDY-KSTFP-----RW 250

  Fly   256 DNLFPSCTHAV-------EINLVSNLVVYNPKNRLKA 285
            ..:   ..|.|       .|.|:|.::||:|.:|:.|
pombe   251 KRM---DLHKVVPNGEEDAIELLSAMLVYDPAHRISA 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 109/297 (37%)
cdc2NP_001342995.1 STKc_CDK1_CdkB_like 4..293 CDD:270829 109/297 (37%)

Return to query results.
Submit another query.