DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6800 and cdk-1

DIOPT Version :9

Sequence 1:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001022747.1 Gene:cdk-1 / 176374 WormBaseID:WBGene00000405 Length:332 Species:Caenorhabditis elegans


Alignment Length:315 Identity:107/315 - (33%)
Similarity:167/315 - (53%) Gaps:57/315 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YAPSRYKMLEKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKFGNIALNTLREIKTLQLCKSEYI 68
            |..:.:..|||||||.:|.|:|..:.:.|..||:||:.|:::...:....:|||..|:..:    
 Worm    17 YTLNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQ---- 77

  Fly    69 LDIIDIYPDLTGLSLVLEYQPDTLYNRL-------------------KSEVNPLSRQQVRKFAHQ 114
                  :|::.||..|:..:     |||                   |.|..||  :.::.:..|
 Worm    78 ------HPNVVGLEAVIMQE-----NRLFLIFEFLSFDLKRYMDQLGKDEYLPL--ETLKSYTFQ 129

  Fly   115 MFKGIAYLHEAGLMHRDIKPANLLISDTDMLKIADFGLAR-LYFPEDESRLYSPQVSTRWYRAPE 178
            :.:.:.:.|:..::|||:||.|||:.:...:|:||||||| :..|   .|:|:.:|.|.||||||
 Worm   130 ILQAMCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAIGIP---IRVYTHEVVTLWYRAPE 191

  Fly   179 ILFGSQKYGTGVDMWAAGCVVAEMLRGVPLFAGTTDIEQLAIIIRTLGSPRLNQWPELTSLPDYS 243
            ||.|:|:|..|||||:.||:.|||....|||.|.::|::|..|.|.||:|...:|..:.||||| 
 Worm   192 ILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDY- 255

  Fly   244 KIRFPNSVGIHW------DNLFPSCT--HAVE---INLVSNLVVYNPKNRLKASE 287
            |..||.     |      |..:...|  |.::   .:|:..|::|:|..||.|.:
 Worm   256 KATFPK-----WRENFLRDKFYDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 106/311 (34%)
S_TKc 9..288 CDD:214567 106/310 (34%)
cdk-1NP_001022747.1 PLN00009 19..315 CDD:177649 106/313 (34%)
STKc_CDK1_euk 21..312 CDD:270845 106/311 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.