DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6800 and Cdk5

DIOPT Version :10

Sequence 1:NP_650984.1 Gene:CG6800 / 42562 FlyBaseID:FBgn0038902 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_031694.1 Gene:Cdk5 / 12568 MGIID:101765 Length:292 Species:Mus musculus


Alignment Length:291 Identity:112/291 - (38%)
Similarity:163/291 - (56%) Gaps:25/291 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RYKMLEKIGEGVHGCVFKAIDLQRNKEVAIKKVALKNKFGNIALNTLREIKTLQLCKSEYILDII 72
            :|:.|||||||.:|.||||.:.:.::.||:|:|.|.:....:..:.||||..|:..|.:.|:.:.
Mouse     3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

  Fly    73 DIYPDLTGLSLVLEYQPDTLYNRLKSEVNPLSRQQVRKFAHQMFKGIAYLHEAGLMHRDIKPANL 137
            |:......|:||.|:....|.....|....|..:.|:.|..|:.||:.:.|...::|||:||.||
Mouse    68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132

  Fly   138 LISDTDMLKIADFGLARLY-FPEDESRLYSPQVSTRWYRAPEILFGSQKYGTGVDMWAAGCVVAE 201
            ||:....||:|||||||.: .|   .|.||.:|.|.|||.|::|||::.|.|.:|||:|||:.||
Mouse   133 LINRNGELKLADFGLARAFGIP---VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194

  Fly   202 MLR-GVPLFAGTTDIEQLAIIIRTLGSPRLNQWPELTSLPDYSKIRFPNSVGIHWDNLFPSCTHA 265
            :.. |.|||.|....:||..|.|.||:|...|||.:|.||||..  :|         ::|:.|..
Mouse   195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKP--YP---------MYPATTSL 248

  Fly   266 VEI---------NLVSNLVVYNPKNRLKASE 287
            |.:         :|:.||:..||..|:.|.|
Mouse   249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6800NP_650984.1 STKc_CCRK 8..295 CDD:270826 112/291 (38%)
Cdk5NP_031694.1 STKc_CDK5 3..286 CDD:143344 112/291 (38%)

Return to query results.
Submit another query.