Sequence 1: | NP_001287456.1 | Gene: | GABA-B-R2 / 42561 | FlyBaseID: | FBgn0027575 | Length: | 1224 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113990.2 | Gene: | Gabbr2 / 83633 | RGDID: | 619864 | Length: | 940 | Species: | Rattus norvegicus |
Alignment Length: | 1015 | Identity: | 368/1015 - (36%) |
---|---|---|---|
Similarity: | 538/1015 - (53%) | Gaps: | 149/1015 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LLFLLLWST--ACG--RTAKR-----SDVYIAGFFPYGDGVENSYTGRGVMPSVKLALGHV-NEH 66
Fly 67 GKILANYRLHMWWNDTQCNAAVGVKSFFDMMHSGPNKVMLFGAACTHVTDPIAKASKHWHLTQLS 131
Fly 132 YADTHPMFT-KDAFPNFFRVVPSENAFNAPRLALLKEFNWTRVGTVYQNEPRYSLPHNHMVADLD 195
Fly 196 AMEVEVVETQSFVNDVAESLKKLREKDVRIILGNFNEHFARKAFCEAYKLDMYGRAYQWLIMATY 260
Fly 261 STDWWN----VTQDSECSVEEIATALEGAILVDLLPLSTSGDITVAGITADEYLVEYDRLR-GTE 320
Fly 321 YSRFHGYTYDGIWAAALAIQYV-----AEKREDLLTHFDYRVKDWESVFLEALRNTSFEGVTGPV 380
Fly 381 RFYNNERKANILINQFQLGQMEKIGEYHSQKSHLDLSLGKPVKWVGKTPPKDRTLIYIEHSQVNP 445
Fly 446 TIYIVSASASVIGVIIATVFLAFNIKYRNQRYIKMSSPHLNNLIIVGCMMTYLSIIFLGLDTTLS 510
Fly 511 SVAAFPYICTARAWILMAGFSLSFGAMFSKTWRVHSIFTDLKLNKKVIKDYQLFMVVGVLLAIDI 575
Fly 576 AIITTWQIADPFYR--ETKQLEPLHHENID----DVLVIPENEYCQSEHMTIFVSIIYAYKGLLL 634
Fly 635 VFGAFLAWETRHVSIPALNDSKHIGFSVYNVFITCLAGAAISLVLSDRKDLVFVLLSFFIIFCTT 699
Fly 700 ATLCLVFVPKVRLVLVELKRNPQGVV-DKRVRATLRPMSKNGRRDSSVCELEQ----RLRDVKNT 759
Fly 760 NCRFRKALMEKENELQALIRKL--GPEARKWIDGVTCTGGSNVGSELEPILNDDIVRLSAPPVRR 822
Fly 823 EMPSTTVTEMT-SVDSVTSTHVEMDNSFVSVQSTVMAPSLPPKKKKQSIVEHHSHAPAPTMMQPI 886
Fly 887 QQ-QLQQHLQQHQQMQQQHLQQQQHQQMQQQQQQQQHHHRHLEKRNSVSAQTDDNIGSITSTAGK 950
Fly 951 RSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSSSHRN 990 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GABA-B-R2 | NP_001287456.1 | PBP1_GABAb_receptor | 32..418 | CDD:107361 | 159/397 (40%) |
ANF_receptor | 52..396 | CDD:279440 | 144/355 (41%) | ||
7tm_3 | 459..712 | CDD:278433 | 138/258 (53%) | ||
Gabbr2 | NP_113990.2 | PBP1_GABAb_receptor | 57..459 | CDD:380589 | 159/404 (39%) |
7tmC_GABA-B-R2 | 479..748 | CDD:320421 | 142/278 (51%) | ||
TM helix 1 | 480..504 | CDD:320421 | 8/23 (35%) | ||
TM helix 2 | 516..537 | CDD:320421 | 11/20 (55%) | ||
TM helix 3 | 553..575 | CDD:320421 | 12/21 (57%) | ||
TM helix 4 | 598..614 | CDD:320421 | 6/15 (40%) | ||
TM helix 5 | 652..675 | CDD:320421 | 15/22 (68%) | ||
TM helix 6 | 688..710 | CDD:320421 | 14/21 (67%) | ||
TM helix 7 | 717..742 | CDD:320421 | 13/24 (54%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 762..789 | 6/26 (23%) | |||
GBR2_CC | 778..816 | CDD:375881 | 8/37 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166344237 | |
Domainoid | 1 | 1.000 | 283 | 1.000 | Domainoid score | I1570 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1055 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H55902 | |
Inparanoid | 1 | 1.050 | 592 | 1.000 | Inparanoid score | I946 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D267884at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005571 | |
OrthoInspector | 1 | 1.000 | - | - | oto98475 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102670 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10519 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5209 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.760 |