DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R2 and Gpr156

DIOPT Version :10

Sequence 1:NP_001287456.1 Gene:GABA-B-R2 / 42561 FlyBaseID:FBgn0027575 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_700443.2 Gene:Gpr156 / 239845 MGIID:2653880 Length:798 Species:Mus musculus


Alignment Length:871 Identity:202/871 - (23%)
Similarity:330/871 - (37%) Gaps:239/871 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 KPVKWVGKTPPKDRTLIYIEHSQ-----VNPTIYIVSASASVIGVIIATVFLAFNIKYRNQRYIK 479
            :|:..:.||     |:...:||.     ::|.:..:..:....|:::...||||.|:.|..|.:|
Mouse    22 RPLHDLCKT-----TITESQHSSTAASPLSPALLGIMWTFLSCGLLLVLFFLAFTIRCRKNRIVK 81

  Fly   480 MSSPHLNNLIIVGCMMTYLSIIFLGLDTTL--SSVAAFPYICTARAWILMAGFSLSFGAMFSKTW 542
            ||||:||.:.::|..:||:|....|:...|  |||.|   :...|..:|..|.||.||.:..|:|
Mouse    82 MSSPNLNVVTLLGSCLTYISAYLFGIQDALEGSSVEA---LIQTRLSLLCIGTSLVFGPILGKSW 143

  Fly   543 RVHSIFTDLKLNKKV-IKDYQLFMVVGVLLAIDIAIITTWQIADPFYRETKQLEPLHHENI---- 602
            |::.:||....:|:| |||.||..:|..|:..|:.::.||.:.||       ::.|....:    
Mouse   144 RLYKVFTQRVPDKRVIIKDLQLLGLVAALVVADVILLVTWVLTDP-------IQCLQMLGVSMKV 201

  Fly   603 ---DDVLVIPENEYCQSEHMTIFVSIIYAYKGLLLVFGAFLAWETRHVSIPALNDSKHIGFSVYN 664
               |....:....:|.|.:..::::::...|||||::||:||..|.|||.|.:|.|..|...|..
Mouse   202 TGRDVSCSLTNTHFCASRYSDVWIALVLGCKGLLLLYGAYLAGLTNHVSSPPVNQSLTIMVGVNL 266

  Fly   665 VFITCLAGAAISLVLSDRKDLVFVLLSFFIIFCTTATLCLVFVPKVRLVLVELKRNPQGVVDKRV 729
            :.:|......::..|....:|||.|.|..|..|||...|.||:|:::          |....:..
Mouse   267 LLLTAGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCCVFIPQLK----------QWKAFEGE 321

  Fly   730 RATLRPMSK---------NGRRDSS-VCELEQRLRDVKNTNCRFRKALMEKENELQALIRKLGPE 784
            ..|:|.|:|         :|:.|.. .|    .|||.|  :| ..:.|.||...:::|..::   
Mouse   322 NQTMRHMAKYFSTPSKSFHGQFDEDPSC----HLRDEK--SC-MERLLTEKNAVIESLQEQV--- 376

  Fly   785 ARKWIDGVTCTGGSNVGSELEPILNDDIVRLSAPPVRREMPSTTVTEMTSVDSVTSTHVEMDNSF 849
                         ||.        .:.:|:|.:.....:.|...|.:..|...:           
Mouse   377 -------------SNA--------KEKLVKLMSAECTYDSPEWAVPDAASARGL----------- 409

  Fly   850 VSVQSTVMAPSLPPKKKKQSIVEHHS--------HAPA-------------PTMMQPIQQ----- 888
                      :||...:..::.|:.|        |.||             .|...|.||     
Mouse   410 ----------ALPGPSECPAVSENESGAAARDSLHVPAACQHVQGPGASRRDTSPSPAQQDNMPL 464

  Fly   889 -QLQQHL----QQHQQMQQQHLQQQQHQQMQQQQQQ--------QQHHHRHLEKRNSVSAQTDDN 940
             |...||    .|..:.:|....::..|:.....|:        :.|..|          |:.:.
Mouse   465 KQYCDHLDTGCNQKPKAEQSEGPERGDQEPMAPSQRLMADGVACEPHKPR----------QSPEG 519

  Fly   941 IGSITSTAGKRSGGDCSSMRERRQSTASRHYDSGSQTPTARPKYSSSHRNSSTNISTSQSELSNM 1005
            :       .|:..|..|.:||:.|... :..|.||:.|.:..........|:|  |.|..:||  
Mouse   520 L-------PKKLPGVSSVVREKLQEVL-QELDLGSEAPLSPLPCPQQLWKSTT--SRSPQKLS-- 572

  Fly  1006 CPHSKPSTPAVIKTPTASDHRRT--------SMGSALKSNFVVSQSDLWDTHTLSHAKQRQSPRN 1062
             |.....:|.|::...|:...|:        ::|....|....|||.|       ..:.|.||| 
Mouse   573 -PSKLGFSPYVVRRRRAAQRARSHIPGSVGLNVGHQANSTVSSSQSGL-------IVQNRDSPR- 628

  Fly  1063 YASPQRCAEHHGGHGMTYDPNTTSPIQRSVSEKNRNKHRPKPQKGTVCQSETDSERERDPPPNSQ 1127
                   .:|:         |..|.:.||.|.|......|:.::||:   |...:.|.:|.....
Mouse   629 -------LDHN---------NARSKVPRSSSVKPSPLSEPRRKQGTL---EGSKQCETEPQEAGG 674

  Fly  1128 PCVQPRKVSRSSNIQHAAHHHSSPNVAPDKQRSRQRGKQDSSIYGASSETELLEGETAILPIFRK 1192
            .|                      |||...|.|       :|:...|.....|....| ||    
Mouse   675 AC----------------------NVAFPCQSS-------ASVQAQSPAAPCLPSSPA-LP---- 705

  Fly  1193 LLTEKSPNYRGRSAVGQSCPNISIKC 1218
              .::.|    |..:...||::|..|
Mouse   706 --RQRQP----RPRLSPGCPSLSSGC 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R2NP_001287456.1 PBP1_GABAb_receptor 32..426 CDD:380589 1/5 (20%)
7tmC_GABA-B-R2 446..719 CDD:320421 88/282 (31%)
TM helix 1 446..471 CDD:320421 5/24 (21%)
TM helix 2 483..504 CDD:320421 7/20 (35%)
TM helix 3 520..544 CDD:320421 9/23 (39%)
TM helix 4 563..583 CDD:320421 6/19 (32%)
TM helix 5 619..645 CDD:320421 9/25 (36%)
TM helix 6 654..677 CDD:320421 4/22 (18%)
TM helix 7 684..709 CDD:320421 12/24 (50%)
PHA03307 934..>1161 CDD:223039 50/234 (21%)
Gpr156NP_700443.2 7tmC_GPR156 48..317 CDD:320419 89/288 (31%)
TM helix 1 48..73 CDD:320419 5/24 (21%)
TM helix 2 85..106 CDD:320419 7/20 (35%)
TM helix 3 121..145 CDD:320419 9/23 (39%)
TM helix 4 165..185 CDD:320419 6/19 (32%)
TM helix 5 221..247 CDD:320419 9/25 (36%)
TM helix 6 256..279 CDD:320419 4/22 (18%)
TM helix 7 286..311 CDD:320419 12/24 (50%)
rad18 347..>538 CDD:273165 44/259 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..497 10/55 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..666 34/151 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..715 6/32 (19%)

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