DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R2 and gpr156

DIOPT Version :10

Sequence 1:NP_001287456.1 Gene:GABA-B-R2 / 42561 FlyBaseID:FBgn0027575 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_004919836.1 Gene:gpr156 / 101730302 XenbaseID:XB-GENE-962217 Length:792 Species:Xenopus tropicalis


Alignment Length:813 Identity:180/813 - (22%)
Similarity:307/813 - (37%) Gaps:179/813 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 SHLDLSLGK-----------PVKWVGKTPPKDRTLIYIEHSQVNPTIYIVSASASVIGVIIATVF 465
            ||:|..|.|           .|.|..            :..||:..:..:|.:....|:::...|
 Frog    13 SHIDTGLEKEEAAKVLQELCKVSWAP------------QRKQVSAAVLGISGALLSAGLLLTLFF 65

  Fly   466 LAFNIKYRNQRYIKMSSPHLNNLIIVGCMMTYLS-IIFLGLDTTLSSVAAFPYICTARAWILMAG 529
            ..|.:::|:.|.:|||||:||.:.::|..:||:| .:|:..:..:|....|    ..|..:|..|
 Frog    66 FIFTLRFRSNRIVKMSSPNLNLVTLIGSALTYISAFLFVVQEPNISMETIF----QVRISLLYLG 126

  Fly   530 FSLSFGAMFSKTWRVHSIFTDLKLNKKV-IKDYQLFMVVGVLLAIDIAIITTWQIADPFYRETKQ 593
            .:|.||.:..|:||:|.:||....:|:| |||..|..:|..||..|..::..|.::||.......
 Frog   127 VTLVFGPLLGKSWRLHRVFTHRVPDKRVIIKDVTLLSLVAGLLFADTLLLLMWVLSDPVVCARSA 191

  Fly   594 LEPLHHENIDDVLVIPENEYCQSEHMTIFVSIIYAYKGLLLVFGAFLAWETRHVSIPALNDSKHI 658
            ...:.......:..:...::|.|::..::..::..:|..||::|.:||..|.::|.|.:|.|  :
 Frog   192 SASIKAAARGTLYSVTTQDFCASKYSDLWTGLLVGFKAALLIYGGYLAGLTNNISSPPVNQS--L 254

  Fly   659 GFSVYNVFITCLAGAA--ISLVLSDRKDLVFVLLSFFIIFCTTATLCLVFVPKVRLVLVELKRNP 721
            ...:.|..:....||.  ::....|..:||:...|..|:.||||..||:|:|:   :|...:...
 Frog   255 AIMIGNGLVMAGTGAVFLVTHFFHDWSNLVYATTSGSILVCTTAINCLIFIPQ---LLQSRQFEE 316

  Fly   722 QGVVDKRVRATLRPMSKNGRRDSSVCELEQRLRDVKNTNCRFRKALMEKENELQALIRKLGPEAR 786
            :.|...::.......||:.|...|    |:::..:...|...||.|.||    .|:|..|..:. 
 Frog   317 EQVQSTQMSKYFSSPSKSFRSMYS----EEQIYHLLGENTSMRKLLSEK----NAIIESLQEQV- 372

  Fly   787 KWIDGVTCTGGSNVGSELEPILNDDIVRLSAPPVRREMPSTTVTEMTSVDSVTSTHVEMDNSFVS 851
                       ||...:|..::..:.             |....|:||:                
 Frog   373 -----------SNAKEKLMKLIKSEC-------------SFETIEVTSL---------------- 397

  Fly   852 VQSTVMAPSLPPKKKKQSIVEHHSHAPAPTMMQPIQQQLQ-----QH---LQQHQQMQQQH---- 904
              |.:.|.:|        .::||   .||..|:.|::.|.     .|   ::..|::..:|    
 Frog   398 --SVLSASTL--------AIQHH---VAPEHMKTIEEPLDSVENADHEAVIKDTQEVDIKHDTKS 449

  Fly   905 --LQQQQHQQMQQQQQQQQHHHRHLEKRN--SVSAQTDDNIGSITSTAGKRSGGDCSSMRERRQS 965
              .|..:.|.:|:.:::.|...:...|.:  |||.|.|      .||:..||......:      
 Frog   450 DAFQSPKDQNIQESEEKPQEGSQCTNKPSGCSVSKQED------MSTSDSRSVSFADIV------ 502

  Fly   966 TASRHYDSGSQTPTARPKYSSSHRN----SSTNISTSQSELS--NMCPHSKPSTPAVIKTPTASD 1024
            :.|.|...|..:...........|.    ||..:.....|||  ..|.|..|..           
 Frog   503 SKSHHQHPGEASERTHDVLEQLSRKINYVSSEKLQEILQELSIETTCGHHSPKR----------- 556

  Fly  1025 HRRTSMGSALKSNFVVSQSDLWDTHTLS--HAKQRQSPRNYASPQRCAEHHGGHGMTYDPNTTSP 1087
            .||.|.........|.|:.......:||  ..::|:.| .|:...:...||       .||...|
 Frog   557 QRRASHSVNRDPGLVPSEGFRKMCVSLSPYMMRRRRGP-VYSQRNQHPSHH-------FPNALPP 613

  Fly  1088 IQRSVSEKN-RNKHRPKPQKGTVCQSETDSERERDPPPNSQPCVQPRKVSRSSNIQHAAHHHSSP 1151
            ....:..|. ||:          |.....:..||..|...:...:       .||.|..|:.|..
 Frog   614 QTWCLLNKEARNR----------CNGVKTTRDERPSPTGEERTAE-------GNIGHGHHNPSLL 661

  Fly  1152 NVA-----PDKQRSRQRGKQD---SSIYGASSE 1176
            ..|     |.::.:|.|...|   :..|..:||
 Frog   662 TKAMELSVPGREENRSRVDNDIWMTPKYSYASE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R2NP_001287456.1 PBP1_GABAb_receptor 32..426 CDD:380589 7/24 (29%)
7tmC_GABA-B-R2 446..719 CDD:320421 75/276 (27%)
TM helix 1 446..471 CDD:320421 4/24 (17%)
TM helix 2 483..504 CDD:320421 8/21 (38%)
TM helix 3 520..544 CDD:320421 8/23 (35%)
TM helix 4 563..583 CDD:320421 6/19 (32%)
TM helix 5 619..645 CDD:320421 6/25 (24%)
TM helix 6 654..677 CDD:320421 4/24 (17%)
TM helix 7 684..709 CDD:320421 11/24 (46%)
PHA03307 934..>1161 CDD:223039 48/240 (20%)
gpr156XP_004919836.1 7tmC_GPR156 71..313 CDD:320419 71/250 (28%)
TM helix 2 83..104 CDD:320419 7/20 (35%)
TM helix 3 117..141 CDD:320419 8/23 (35%)
TM helix 4 161..181 CDD:320419 6/19 (32%)
TM helix 5 217..243 CDD:320419 6/25 (24%)
TM helix 6 252..275 CDD:320419 4/24 (17%)
TM helix 7 282..307 CDD:320419 11/24 (46%)

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