DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Burs and gcdh

DIOPT Version :9

Sequence 1:NP_650983.1 Gene:Burs / 42560 FlyBaseID:FBgn0038901 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_012808612.1 Gene:gcdh / 549043 XenbaseID:XB-GENE-1016447 Length:484 Species:Xenopus tropicalis


Alignment Length:107 Identity:17/107 - (15%)
Similarity:32/107 - (29%) Gaps:41/107 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GCVPKPIPSFACVGRCASYIQVSGSKIWQMERSCMCCQESGEREAAVSLFCPKVKPGERKFKKVL 129
            |.:...|..:.|.|  .||:                         |..|...:|:..:..::.|:
 Frog   150 GVLGSTIKGYGCAG--TSYV-------------------------AYGLLAREVERVDSSYRSVM 187

  Fly   130 TKAPLECMCRPCTSIEESGIIPQEIAGYSDEGPLNNHFRRIA 171
            :              .:|.::...||.|..|.....:..|:|
 Frog   188 S--------------VQSSLVMHPIAAYGSEEQKQKYLPRLA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BursNP_650983.1 GHB_like 50..138 CDD:419725 10/72 (14%)
gcdhXP_012808612.1 GCD 94..480 CDD:173840 17/107 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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