DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Burs and Tecta

DIOPT Version :9

Sequence 1:NP_650983.1 Gene:Burs / 42560 FlyBaseID:FBgn0038901 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001100284.1 Gene:Tecta / 300653 RGDID:1309824 Length:2155 Species:Rattus norvegicus


Alignment Length:112 Identity:27/112 - (24%)
Similarity:40/112 - (35%) Gaps:24/112 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CVLVSILKLCTAQ-PD--SSVAATDNDITHLGDDCQVTPVIHVLQYPGCVPKPIPSFACVGRCA- 81
            |...|...:||:. ||  |.:.|:.|..|...:.|:..... ||....|||        :.:|. 
  Rat   597 CPSFSHYSVCTSSCPDTCSDLTASQNCATPCTEGCECNEGF-VLSTSQCVP--------LHKCGC 652

  Fly    82 ---SYIQVSGSKIWQMER---SCMCCQESGEREAAVSLFCPKVKPGE 122
               .:....|...|....   .|: |:|.|:    |..|....:.||
  Rat   653 DFEGHYYTMGEFFWATANCTVQCL-CEEGGD----VYCFNKTCRSGE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BursNP_650983.1 GHB_like 50..138 CDD:419725 17/80 (21%)
TectaNP_001100284.1 NIDO 98..254 CDD:214712
VWD 322..478 CDD:278521
C8 517..591 CDD:214843
TIL 597..650 CDD:280072 16/61 (26%)
VWC 652..706 CDD:302663 10/48 (21%)
VWD 703..865 CDD:214566
C8 905..981 CDD:214843
TIL 984..1036 CDD:280072
VWD 1100..1258 CDD:278521
C8 1298..1368 CDD:285899
TIL 1372..1425 CDD:280072
VWD 1487..1639 CDD:278521
C8 1685..1757 CDD:214843
ZP 1805..2059 CDD:214579
Zona_pellucida 1937..2057 CDD:278526
FXa_inhibition 2089..2121 CDD:291342
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.