DRSC/TRiP Functional Genomics Resources

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Protein Alignment Burs and pdlim2

DIOPT Version :9

Sequence 1:NP_650983.1 Gene:Burs / 42560 FlyBaseID:FBgn0038901 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_002932747.1 Gene:pdlim2 / 100488396 XenbaseID:XB-GENE-941744 Length:149 Species:Xenopus tropicalis


Alignment Length:42 Identity:8/42 - (19%)
Similarity:19/42 - (45%) Gaps:11/42 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QYPGCVPKPIPSFACVGRCASYIQVSGSKIWQMERSCMCCQE 103
            ::|||       :.|.. |...:::.| ..|..::  :.|::
 Frog   104 RHPGC-------YVCTD-CGMNLRMRG-HFWAGDQ--LVCEK 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BursNP_650983.1 GHB_like 50..138 CDD:419725 8/42 (19%)
pdlim2XP_002932747.1 DUF4749 <6..40 CDD:374237
LIM 84..136 CDD:351770 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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