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Protein Alignment Burs and pdlim2
DIOPT Version :9
Sequence 1: | NP_650983.1 |
Gene: | Burs / 42560 |
FlyBaseID: | FBgn0038901 |
Length: | 173 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002932747.1 |
Gene: | pdlim2 / 100488396 |
XenbaseID: | XB-GENE-941744 |
Length: | 149 |
Species: | Xenopus tropicalis |
Alignment Length: | 42 |
Identity: | 8/42 - (19%) |
Similarity: | 19/42 - (45%) |
Gaps: | 11/42 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 QYPGCVPKPIPSFACVGRCASYIQVSGSKIWQMERSCMCCQE 103
::||| :.|.. |...:::.| ..|..:: :.|::
Frog 104 RHPGC-------YVCTD-CGMNLRMRG-HFWAGDQ--LVCEK 134
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Burs | NP_650983.1 |
GHB_like |
50..138 |
CDD:419725 |
8/42 (19%) |
pdlim2 | XP_002932747.1 |
DUF4749 |
<6..40 |
CDD:374237 |
|
LIM |
84..136 |
CDD:351770 |
8/42 (19%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1216 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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