DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42335 and APE2

DIOPT Version :9

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_012765.3 Gene:APE2 / 853699 SGDID:S000001640 Length:952 Species:Saccharomyces cerevisiae


Alignment Length:988 Identity:227/988 - (22%)
Similarity:382/988 - (38%) Gaps:253/988 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LEGSVVPSHYNLTIGVLRNSVEPTI----FDGEVSITLRV----VGTLEVQQIILHADTLDITEC 83
            |..:|||.||:||       |||..    |:|.|.|.|::    :.|:.:..:    ||      
Yeast   102 LPDNVVPLHYDLT-------VEPDFKTFKFEGSVKIELKINNPAIDTVTLNTV----DT------ 149

  Fly    84 WLLDAAGAQVEAIDISRLIYEAATQQVRVPLTEAAQPGK------NYTLGFKYTGHIRTDMAGFF 142
               |...|::..:..|.:|.| ..|||   .|.|...|.      |..|..|:||.:..:||||:
Yeast   150 ---DIHSAKIGDVTSSEIISE-EEQQV---TTFAFPKGTMSSFKGNAFLDIKFTGILNDNMAGFY 207

  Fly   143 SASYVERDTNVTRWLALTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKLKETKAL 207
            .|.|.::.|..|:::|.|||:..:||...||||||.|||.|.:.:|.......::|..:| .:.:
Yeast   208 RAKYEDKLTGETKYMATTQMEPTDARRAFPCFDEPNLKASFAITLVSDPSLTHLSNMDVK-NEYV 271

  Fly   208 SQDRFVDHFKETPVMSTYLLAFMVAN---------------YSARGNE--SEFAV-LTRP--EFY 252
            ...:.|..|..||.|||||:||:||.               |:..|||  .:||. ||..  .|:
Yeast   272 KDGKKVTLFNTTPKMSTYLVAFIVAELKYVESKNFRIPVRVYATPGNEKHGQFAADLTAKTLAFF 336

  Fly   253 DNTEFSYHVGQQVVSAYGELFQSPYAELGNDVLQYASSPRFPHNGMENWGLIIYS-DDVLIQEPG 316
            :.|             :|  .|.|..::.|..:.     .|....||||||:.|. .|:|:.:..
Yeast   337 EKT-------------FG--IQYPLPKMDNVAVH-----EFSAGAMENWGLVTYRVVDLLLDKDN 381

  Fly   317 YSDDWSDKEFAIRIIAHETSHMWFGDSVTFSWWSYFWLNEAFARYYEYFMAHQLYPDYHLDEQFV 381
            .:.|...:  ...::.||.:|.|||:.||..||...||||.||.:..::..::..|::.:.||:|
Yeast   382 STLDRIQR--VAEVVQHELAHQWFGNLVTMDWWEGLWLNEGFATWMSWYSCNEFQPEWKVWEQYV 444

  Fly   382 VRQMQLIFGTDAQNGTQPMTSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNLMGAENFDTAIR 446
            ...:|.....|:...:.|:..|..:....:||   |..|:|:|||.::||....:|.|.|...:.
Yeast   445 TDTLQHALSLDSLRSSHPIEVPVKKADEINQI---FDAISYSKGASLLRMISKWLGEETFIKGVS 506

  Fly   447 SYLQQYHLTNTVPYNLFYHLFEHWPKNQDV---DLVDFLTDYTEQVGYPMIIVKALQGNKVVTVE 508
            .||.::...|....:|       |....|.   |:...:..:|::||:|:|.|.. .||..:|..
Yeast   507 QYLNKFKYGNAKTEDL-------WDALADASGKDVRSVMNIWTKKVGFPVISVSE-DGNGKITFR 563

  Fly   509 QSRFLLNKD----------------------DGS------NATLKYTVPITFTTNLERDFYNLTP 545
            |:|:|...|                      |.|      :.|::...|..|..|.|:....:|.
Yeast   564 QNRYLSTADVKPDEDKTIYPVFLALKTKNGVDSSVVLSERSKTIELEDPTFFKVNSEQSGIYITS 628

  Fly   546 YKYLHKTVNVLWLDFTSPIDWILFNLRQSNYQRVFYDDTLREGLLLAISATNHSGIPVENRAQII 610
            |      .:..|.......|                        ||:          ||:|..::
Yeast   629 Y------TDERWAKLGQQAD------------------------LLS----------VEDRVGLV 653

  Fly   611 DDLFNFAQAQYVDYADVFRFLEYLAKEVEYVPWYAVYENLNTVAKR--LTPEQLPDFRIYLSSIT 673
            .|:...:.:.|....:....:.....|..:|.|..:..:::::...  ..|::..|   .|.:.|
Yeast   654 ADVKTLSASGYTSTTNFLNLVSKWNNEKSFVVWDQIINSISSMKSTWLFEPKETQD---ALDNFT 715

  Fly   674 AAVFEKL--GVGWNAQDTPLDVANRNKLIKWLCRYQASNCRPKVNVQFVTGHEVPSPDYRETFY- 735
            ..:...:  .:||                                 :|.:.....:...:.|.: 
Yeast   716 KQLISGMTHHLGW---------------------------------EFKSSDSFSTQRLKVTMFG 747

  Fly   736 --CAASGADYNSYTM-LWGQYYLENRTSEKNML-------WAAISCTRDYETHYHKMI--ISGTE 788
              |||..||.....: ::..|...|:.:...::       .|.:....:||..|...:  ||..|
Yeast   748 AACAARDADVEKAALKMFTDYCSGNKEAIPALIKPIVFNTVARVGGAENYEKVYKIYLDPISNDE 812

  Fly   789 SVEQKKIGIARMYEE----------------NPDL-------------VQAIFEMITENIMELAY 824
            .:...: .:.|..|.                |.|:             |:|::..:.:|..||..
Yeast   813 KLAALR-SLGRFKEPKLLERTLGYLFDGTVLNQDIYIPMQGMRAHQEGVEALWNWVKKNWDELVK 876

  Fly   825 NF-QSWSDTAEVINDMAEYFTTREQQQLLKEFYYS-NHQFFGESEELLSKSLVTVEKNLNWAETH 887
            .. ...|....|:......||:.::...:|:|:.: :.:.|.:|   |::||.|:.....|....
Yeast   877 RLPPGLSMLGSVVTLGTSGFTSMQKIDEIKKFFATKSTKGFDQS---LAQSLDTITSKAQWVNRD 938

  Fly   888 LEGLVKYLADRNG 900
            .:.:.|||.: ||
Yeast   939 RDVVNKYLKE-NG 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 Peptidase_M1 26..425 CDD:279741 129/432 (30%)
M1_APN_2 34..492 CDD:189008 143/495 (29%)
ERAP1_C 567..874 CDD:288671 50/354 (14%)
APE2NP_012765.3 PepN 90..941 CDD:223385 222/976 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X67
TreeFam 00.000 Not matched by this tool.
44.010

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