DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42335 and RNPEP

DIOPT Version :9

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_064601.3 Gene:RNPEP / 6051 HGNCID:10078 Length:650 Species:Homo sapiens


Alignment Length:555 Identity:120/555 - (21%)
Similarity:204/555 - (36%) Gaps:132/555 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 WLA------------LTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKLKETKALS 208
            |||            .||.|.:..|...||||.||:|.::...|..|:|:.::.:....|.:  .
Human   152 WLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKYKYSALIEVPDGFTAVMSASTWEKR--G 214

  Fly   209 QDRFVDHFKETPVMSTYLLAFMVANYSARGNESEFAVLTRPEFYDNTEFSYHVGQQVVSAYGELF 273
            .::|  .|:....:.:||:|..:.:..:........|...|...|..:..|:...:...|.||..
Human   215 PNKF--FFQMCQPIPSYLIALAIGDLVSAEVGPRSRVWAEPCLIDAAKEEYNGVIEEFLATGEKL 277

  Fly   274 QSPYAELGNDVLQYASSPRFPHNGMENWGLIIYSDDVLIQEPGYSDDWSDKEFAIRIIAHETSHM 338
            ..||.....|:|  ...|.||..||||..|...:..:|..:...:|          :|.||.||.
Human   278 FGPYVWGRYDLL--FMPPSFPFGGMENPCLTFVTPCLLAGDRSLAD----------VIIHEISHS 330

  Fly   339 WFGDSVTFSWWSYFWLNEAFARYYEYFMAHQLY-PDYHLDE----QFVVRQMQLIFGTDAQNGTQ 398
            |||:.||.:.|..|||||.|..|.:..::..|: ..|...|    :.::||...|.|.:     .
Human   331 WFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDITGEE-----N 390

  Fly   399 PMTSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNLMG-AENFDTAIRSYLQQYHLTNTVPYNL 462
            |:.....:|:........::...|.||.|.|....:|:| .:.||:.:::|:.::...:.:..:.
Human   391 PLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDSFLKAYVHEFKFRSILADDF 455

  Fly   463 FYHLFEHWP--KNQDVDLV-DFLTD-YTEQVGYPMIIVKALQGNKVVTVEQSRFLLNKDDGSNAT 523
            .....|::|  |.:.||:: .|..| :....|:|..:.....|:.:                   
Human   456 LDFYLEYFPELKKKRVDIIPGFEFDRWLNTPGWPPYLPDLSPGDSL------------------- 501

  Fly   524 LKYTVPITFTTNLERDFYNLTPYKYLHKTVNVLW----LDF-------TSPIDWILFNLRQSNYQ 577
                               :.|.:.|.:    ||    ||.       .||  |       ..||
Human   502 -------------------MKPAEELAQ----LWAAEELDMKAIEAVAISP--W-------KTYQ 534

  Fly   578 RVFYDDTLREGLLLAISATNHSGIPVENRAQIIDDLFNFAQAQYV-----------------DYA 625
            .|::.|.:.:          .|.:|..|..::.|...:.:.|:..                 |:.
Human   535 LVYFLDKILQ----------KSPLPPGNVKKLGDTYPSISNARNAELRLRWGQIVLKNDHQEDFW 589

  Fly   626 DVFRFLEYLAKEVEYVPWYAVYENLNTVAKRLTPE 660
            .|..||....|:...:|.|......:.||:.|..|
Human   590 KVKEFLHNQGKQKYTLPLYHAMMGGSEVAQTLAKE 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 Peptidase_M1 26..425 CDD:279741 72/285 (25%)
M1_APN_2 34..492 CDD:189008 89/357 (25%)
ERAP1_C 567..874 CDD:288671 20/111 (18%)
RNPEPNP_064601.3 leuko_A4_hydro 24..634 CDD:274120 120/555 (22%)
M1_LTA4H 24..484 CDD:189006 88/352 (25%)
Substrate binding. /evidence=ECO:0000250 298..302 2/3 (67%)
Leuk-A4-hydro_C 504..644 CDD:286244 29/144 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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