DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42335 and Lvrn

DIOPT Version :9

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:XP_038953134.1 Gene:Lvrn / 502160 RGDID:1562779 Length:993 Species:Rattus norvegicus


Alignment Length:916 Identity:240/916 - (26%)
Similarity:382/916 - (41%) Gaps:163/916 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RLEGSVVPSHYNLTIGVL---RNSVEPTI-FDGEVSITLRVVGTLEVQQIILHADTLDI--TECW 84
            ||...:||.||:|.:...   .|...|:: |.|.|:||:|.  |:....::||:..|:.  .|.|
  Rat    94 RLPPWLVPLHYDLELWPRLQPDNLSTPSLTFTGRVNITVRC--TVATSTLLLHSFFLNYKQVEVW 156

  Fly    85 ---LLDAAGAQVEAIDISRLIYEAATQQVRVPLTEAAQPGKNYTLGFKYTGHI-RTDMAGFFSAS 145
               ..|...|.|..:.:..:.:....|.|.:.|.::..||.:|.|.|.::|.: :....|.|...
  Rat   157 GPLAPDTRNATVGRVPLENVWFALDMQYVVLDLGQSLDPGSSYELNFDFSGQVLQEGSEGLFLNL 221

  Fly   146 YVERDTNVTRWLALTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKLKETKALSQD 210
            |.:.|.  .|.|..|||:...||.|.||||||||||.|.:.|:...||.:::|     ...|.|.
  Rat   222 YTDEDQ--LRALIATQMEPTFARHVFPCFDEPALKATFNITIIHHPGYVALSN-----MPQLGQS 279

  Fly   211 RFVD---------HFKETPVMSTYLLAFMVANY-----SARGNESEFAVLTRPEFYDNTEFSY-- 259
            ..:|         .|..||.|.|||:|.::.::     :.||  .|..|..|.   |:....|  
  Rat   280 HRIDVNGSRWTVTSFHTTPRMPTYLVALVICDFDYVSRTERG--KEIRVWARK---DDIADGYLD 339

  Fly   260 ----HVGQQVVSAYGELFQSPYAELGNDVLQYASSPRFPHNGMENWGLIIYSDDVLIQEPGYSDD 320
                |.| .|.|...:||...|.....|::   :.|.|.:..||||||:|:...:|::   ..||
  Rat   340 FAANHTG-PVFSFLEDLFNISYPLPKTDII---ALPTFVNGAMENWGLMIFDASLLLE---LDDD 397

  Fly   321 WSDKE-FAIRIIAHETSHMWFGDSVTFSWWSYFWLNEAFARYYEYFMAHQLYPDYHLDEQFVVRQ 384
            ..:|. ..:.|::||..|.|||:.||.|||:..||||.||.|:|..:.:..||....:..|.:..
  Rat   398 LPEKRAMILSILSHEVGHQWFGNLVTMSWWNNIWLNEGFASYFEVGLTNYFYPKVPRNMIFFLTV 462

  Fly   385 MQLIFGTDAQNGTQPMTSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNLMGAENFDTAIRSYL 449
            :..|...|....::.:::|........:|...|....|.||||:..|....:....|..|::|||
  Rat   463 LHDILEDDHSLESRAVSTPVENFTETREINRLFDIYTYKKGACMAWMLAGFLSQHLFINALKSYL 527

  Fly   450 QQYHLTNTVPYNLFYHL--------FEHWPKNQDVDLVDFLTDYTEQVGYPMIIVKALQGNKVVT 506
            :.:..:|....:|:.|:        ..|.|    ..:...:..:|.|.|:|:|.:.|..|    .
  Rat   528 ETFSYSNAEQDDLWRHIQMAIDEQSIIHLP----ATVKRIMDSWTHQSGFPVITLNASTG----V 584

  Fly   507 VEQSRFLLNKDDGSNATL----KYTVPITFTTNLERDFYNLTPYKYLHKTVNVLWLDFTSPI--- 564
            |:|..|.|.:.:  |.||    .:.|||.:..|              ..|..::|||.:|.|   
  Rat   585 VKQEPFYLERVE--NQTLLSHNTWIVPIFWMKN--------------GITQPLVWLDKSSMIFPG 633

  Fly   565 --------DWILFNLRQSNYQRVFYD----DTLREGLLLAISATNHSGIPVENRAQIIDDLFNFA 617
                    ||::.|...:.|.||.||    ..|.:.|     ..:...|||.||.|::.|.|..:
  Rat   634 MKLSDSDSDWVILNFNVTGYYRVNYDKLGWKKLNQQL-----EKDPKAIPVINRLQLVSDAFALS 693

  Fly   618 QAQYVDYADVFRFLEYLAKEVEYVPWYAVYENLNTVAKRLTPEQLPDFRIY-------------L 669
            :..|::........:|:|||.|.:.|:.|..||      :..|.:.|.:.|             |
  Rat   694 KNNYIEIETALDLTKYIAKEDEILVWFEVLVNL------INREVVYDVKNYYLYPLLKKYFLKRL 752

  Fly   670 SSI----TAAVFEKLGVGWNAQDTPLDVANRNKLIKWLCRYQASNCRPKVNVQFVTGHEVPS--- 727
            :||    :|.:.|.:.   :.||..|.:....|..:..|.....:|.......|......|.   
  Rat   753 NSIWTIYSAIIRENMA---SLQDNFLSLLPLKKFFETACWLGLEDCLQLSRELFRKWMAHPETAI 814

  Fly   728 -PDYRETFYCAASGADYN-SYTMLWGQYYLENRTSEKNMLW---AAISCTRDYETHYHKMIISGT 787
             |...:...|.|.....| .:..|:..|.  |:|.|:..|:   .|:.|::|..|....|....|
  Rat   815 PPQIEKVVLCNAIALGSNKDWDFLFNLYI--NKTEEQEDLFHLVHAMGCSKDPRTLNRFMEYDIT 877

  Fly   788 ESVEQKKIGIARMYEENPDLVQAIFEMITENIMELAYNFQSWSDTAEVINDMAEYFTTREQQQLL 852
                   :..:|..|.|  |::.:.|  :|....:|.:|        :||:....:.:.....||
  Rat   878 -------VFPSRFNETN--LIEVVAE--SEVGRYVAKDF--------LINNWVAVYESPSLSPLL 923

  Fly   853 KEFYYS 858
            ::::.|
  Rat   924 QQYFVS 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 Peptidase_M1 26..425 CDD:279741 128/429 (30%)
M1_APN_2 34..492 CDD:189008 142/496 (29%)
ERAP1_C 567..874 CDD:288671 71/321 (22%)
LvrnXP_038953134.1 M1_APN-Q_like 102..569 CDD:341064 139/491 (28%)
ERAP1_C 643..915 CDD:403137 69/306 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110058at2759
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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