DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42335 and superdeath

DIOPT Version :10

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_651674.3 Gene:superdeath / 43444 FlyBaseID:FBgn0039640 Length:999 Species:Drosophila melanogaster


Alignment Length:993 Identity:258/993 - (25%)
Similarity:448/993 - (45%) Gaps:147/993 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSIFRAFWLLCSLL---ICVTNAA-----------------------------------DYRL 27
            ::::|..|.:.:|:||   ..|.|.|                                   |.||
  Fly    50 LTTAILLASFFICTLLAVGFIVYNFATCAELEPDSDEDVVCTSYHLRRLKAGHDDTPKYDRDVRL 114

  Fly    28 EGSVVPSHYNLTIGVLRNSVEPTI-----FDGEVSITLRVVGTLEVQQIILHADTLDITECWLLD 87
            ..|:.|..||:||       ||.:     |.|.|.|.:||:.  :...|.:||:.|:|:..   |
  Fly   115 PHSIRPLKYNITI-------EPQLSGNFTFAGSVQIRIRVLE--DCYNITMHAEELNISRS---D 167

  Fly    88 AAGAQV--------EAIDISRLIYEAATQQVRVPLTEAAQPGKNYTLGFKYTGHIRTDMAGFFSA 144
            |:..:|        :.:.|.:.....|.|...:.|.:.......|.:..::.|.|...:.||:.:
  Fly   168 ASVHRVQNNGEPEGDGLRIHKQYLVGAKQFFVIELYDKLLKDVEYVVHLRFDGIIEDYLQGFYRS 232

  Fly   145 SYVERDTNVTRWLALTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKLKETK--AL 207
            ||...  |.|||:|.||.|..:||...||||||||||.|.|.|.||....:|:|..:..:.  |.
  Fly   233 SYEVH--NETRWVASTQFQATDARRAFPCFDEPALKANFTLHIARPRNMTTISNMPIVSSNDHAT 295

  Fly   208 SQDRFVDHFKETPVMSTYLLAFMVANYS--ARGNESEFAVLTRPEFYDNTEFSYHVGQQVVSAYG 270
            ......|||.|:..|||||:|:.:::::  :.||   |||..|.:...:.|::..||.::::...
  Fly   296 MPSYVWDHFAESLPMSTYLVAYAISDFTHISSGN---FAVWARADAIKSAEYALSVGPRILTFLQ 357

  Fly   271 ELFQSPYAELGNDVLQYASSPRFPHNGMENWGLIIYSDDVLIQEPGYSDDWSDKEFAIRIIAHET 335
            :.|...:.....|::   :.|.|....|||||||.:.:..::.:||.:.. ::|:....::.||.
  Fly   358 DFFNVTFPLPKIDMI---ALPEFQAGAMENWGLITFRETAMLYDPGVATA-NNKQRVASVVGHEL 418

  Fly   336 SHMWFGDSVTFSWWSYFWLNEAFARYYEYFMAHQLYPDYHLDEQFVVRQMQLIFGTDAQNGTQPM 400
            :|.|||:.||.||||..||||.||.|.||..|..:.|::...:||||.::|.:|..||.:.:..:
  Fly   419 AHQWFGNLVTPSWWSDIWLNEGFASYMEYLTADAVAPEWKQLDQFVVNELQAVFQLDALSTSHKI 483

  Fly   401 TSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNLMGAENFDTAIRSYLQQYHLTNTVPYNLFYH 465
            :   .|:..|.:|:..|..|:||||:.|:||..:.:....|...:..|||:....:....:|::.
  Fly   484 S---HEVFNPQEISEIFDRISYAKGSTIIRMMAHFLTNPIFRRGLSKYLQEMAYNSATQDDLWHF 545

  Fly   466 LFEHWPKNQDVD----LVDFLTDYTEQVGYPMIIVKALQGNKVVTVEQSRFLLNKDDGSNATLKY 526
            |......:..:|    :.:.:..:|.|.|||::.|.....:.|:.:||.||:.......:.:|.:
  Fly   546 LTVEAKSSGLLDDSRSVKEIMDTWTLQTGYPVVKVSRHPNSDVIRLEQVRFVYTNTTREDESLLW 610

  Fly   527 TVPITFTTNLERDFYNLTPYKYLHKT-VNVLWLDFTSPIDWILFNLRQSNYQRVFYDDTLREGLL 590
            .:||||||:.|.:|.|..|..::.:| :..|.....|...|.:||::|:.|.||.||  |...:.
  Fly   611 YIPITFTTDSELNFANTRPTTWMPRTKLYELENRELSLAKWFIFNVQQTGYYRVNYD--LENWMA 673

  Fly   591 LA---ISATNHSGIPVENRAQIIDDLFNFAQAQYVDYADVFRFLEYLAKEVEYVPWYAVYENLNT 652
            :.   :...|...|...||||:|||:.|.|:..|:.|........||..|:.:|||.|...|...
  Fly   674 ITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSYLSYETAMNLTRYLGHELGHVPWKAAISNFIF 738

  Fly   653 VAKRLTPEQLPD-FRIYLSSITAAVFEKLGVGWNAQDTPLDV---ANRNKLIKWLCRYQASNCRP 713
            :..........| .:.||......|::::|.. ::||...|:   ..|..::...|......|..
  Fly   739 IDSMFVNSGDYDLLKNYLLKQLKKVYDQVGFK-DSQDESEDILVKLKRADILSMACHLGHQECIA 802

  Fly   714 KVNVQFVTGHEVPSPD--------YRETFYCAA--SGADYNSYTMLWGQYYLENRTSEKNMLWAA 768
            :.:..|....:.|:||        .|...||:|  .|.:| .:...:.::...|...||::|..|
  Fly   803 EASRHFQNWMQTPNPDSNNPIVPNLRGVVYCSAIQYGTEY-EWDFAFERFLKTNVPGEKDLLLNA 866

  Fly   769 ISCTRDYETHYHKMIISGTESVEQKKIGIARMYEENPDLVQAIFEMITENIM--ELAYNF--QSW 829
            :.|:::....|..:           :.||:..:....||.: :|..::..::  .:|::|  .:|
  Fly   867 LGCSKEPWLLYRFL-----------RRGISGQHIRKQDLFR-VFAAVSTTVVGQNIAFDFLRNNW 919

  Fly   830 SDTAEVI-NDMAEYFTTREQQQLLKEFYYSNHQF-----FGESEELLSKS-----------LVTV 877
            .:....: :.|:...|.         |.::...|     .||.|..:..:           :..:
  Fly   920 QEIKTYMGSQMSSIHTL---------FKFATKGFNSKFQLGEFENFVKDAHWDYDRPVQQIVEHI 975

  Fly   878 EKNLNWAETHLEGLVKYL 895
            |.:::|...:.:.:|::|
  Fly   976 ETSVDWMNKNYKSIVRWL 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 M1_APN-Q_like 34..487 CDD:341064 142/473 (30%)
ERAP1_C 566..878 CDD:463368 74/349 (21%)
superdeathNP_651674.3 M1_APN-Q_like 121..571 CDD:341064 142/473 (30%)
ERAP1_C 651..976 CDD:463368 74/349 (21%)

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