DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42335 and lta4h

DIOPT Version :9

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:666 Identity:138/666 - (20%)
Similarity:241/666 - (36%) Gaps:176/666 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 HYNLTIGVLRNSVEPTIFDGEVSITLRVVGTLEVQQIILHADTLDITECWLLDAAGAQVEAIDI- 98
            |.||...|   ..:..:..|:|::|:.|:.. :...:.|.:..|.|::.    :|..|....:: 
Zfish    20 HLNLIYHV---DFDRHVLKGKVALTVEVLED-KFSSLTLDSKDLKISKV----SANGQAAKFELG 76

  Fly    99 SRLIYEAATQQVRVPLTEAAQPGKNYTLGFKYTGHIRTDMAGFFSASYVERDTNVT----RWLA- 158
            ::..::.:..::.:|. |.:: |:          |:..:         :|.:|:.|    :||. 
Zfish    77 AKHKFKGSPLEITLPF-ELSR-GQ----------HVIVE---------IEYETSPTATALQWLTP 120

  Fly   159 -----------LTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKL--KETKALSQD 210
                       .:|.|..:.|.::||.|.|::|..:..|:..|....::.:...  :|.......
Zfish   121 KQTAGKKHPYLFSQCQATHCRTMVPCQDTPSVKHTYYAQVSVPRELVALMSALRDGQEPDPSDSS 185

  Fly   211 RFVDHFKETPVMSTYLLAFMVANYSARGNESEFAVLTRPEFYDNTEFSYHVGQQVVSAYGELFQS 275
            |.:..|::...|.:||:|.:|....:|.......|.:..|:.|...:.:...:.::.. .|....
Zfish   186 RVIYRFRQPVPMPSYLIAIVVGALESREIGPRSRVWSEKEYVDEAAYEFAETETMLKT-AESLAG 249

  Fly   276 PYAELGNDVLQYASSPRFPHNGMENWGLIIYSDDVLIQEPGYSDDWSDKEFAIRIIAHETSHMWF 340
            ||.....|||  ...|.||:.||||..|...:..||.         .|:..| .:||||.||.|.
Zfish   250 PYVWGQYDVL--VLPPSFPYGGMENPCLTFVTPTVLA---------GDRSLA-GVIAHEISHSWT 302

  Fly   341 GDSVTFSWWSYFWLNEAFARYYEYFMAHQLYPDYHLDEQFVVRQMQLI------------FGTDA 393
            |:.||...|.:|||||....|.|..:|..:       |...:||.:.|            ||  |
Zfish   303 GNLVTNRTWEHFWLNEGHTVYIERMIARCM-------EGEQLRQFKGIGGWKELHESVKQFG--A 358

  Fly   394 QNGTQPMTSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNLMGA-ENFDTAIRSYLQQY----- 452
            .|....:.....|:.|..    .||.:.|.||..::.....|||. |.|...::||:|.:     
Zfish   359 NNVLTNLVPNLHEVDTDE----AFSSVPYEKGFALLYHLEELMGGPEVFMGFVKSYIQLFAYGSV 419

  Fly   453 -----------------HLTNTVPYNLFYH---------------------LFEHWPKNQDVDLV 479
                             .:.|.|.:|.:.|                     |.:.|.|.::.||.
Zfish   420 TTEEWKNYLFTYFKDKVDILNKVDWNAWMHTPGMAPVRPQYDTTMADACTSLCQKWVKAKEADLA 484

  Fly   480 DFLTDYTEQVGYPMIIVKALQGNKVVTVEQSRFLLNKDDGSNATLKYTVPITFTTNLERDFYNLT 544
            .|.....:|:..|.:|            |....||.:|         .:|::....: .:.|.|.
Zfish   485 SFTEADVKQLNSPQLI------------EFMALLLQED---------PLPLSHVKKM-GEVYKLN 527

  Fly   545 PYKYLHKTVNVLWLDFTSPIDWILFNLRQSNYQRVFYDDTLREGLLLAISATNHSGIPVENRAQI 609
            ..|  :..|...||.......|                   .|.:.||:......| .::....:
Zfish   528 NIK--NAEVRFRWLRICVKAQW-------------------EEAVPLALKMATEQG-RMKFTRPL 570

  Fly   610 IDDLFNFAQAQYVDYA 625
            ..:::||  ::|.|.|
Zfish   571 FTEVYNF--SKYSDEA 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 Peptidase_M1 26..425 CDD:279741 94/420 (22%)
M1_APN_2 34..492 CDD:189008 115/531 (22%)
ERAP1_C 567..874 CDD:288671 9/59 (15%)
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 138/666 (21%)
M1_LTA4H 18..449 CDD:189006 107/483 (22%)
Leuk-A4-hydro_C 467..606 CDD:286244 30/164 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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