DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42335 and ltah-1.1

DIOPT Version :9

Sequence 1:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001023056.1 Gene:ltah-1.1 / 178176 WormBaseID:WBGene00016589 Length:609 Species:Caenorhabditis elegans


Alignment Length:595 Identity:142/595 - (23%)
Similarity:230/595 - (38%) Gaps:153/595 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TNAADYRLEGSVVPSHYNLTIGVLRNSVEPTIFDGEVSITLRVVGTLEVQQIILHADTLDITECW 84
            :.||:|.   .|..|||.|...|   ..|.....|:|||||.|  ..:.::|:|  ||.|::   
 Worm    10 STAANYE---QVTVSHYALKWKV---DFEKKHIAGDVSITLDV--KQDTERIVL--DTRDLS--- 61

  Fly    85 LLDAAGAQVEAIDIS--------RLIYEAATQQVRVPLTEAAQPGKNYTLGFKYTGHIRTDMAGF 141
                  .|..|::::        .|....|..|..|..||:.:.|....|..||..........|
 Worm    62 ------VQSVALNLNGEPKKAGFTLEDNQALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQF 120

  Fly   142 FSASYVERDTNVTRWLALTQMQRINARLVLPCFDEPALKAQFQLQIVRPNGYQSIANTKLKETKA 206
            .:|   |:.|:.......:|.|.||||.::||.|.|::|:.::.::..|.|...:.:       |
 Worm   121 LTA---EQTTDRVAPYLFSQCQAINARSIVPCMDTPSVKSTYEAEVCVPIGLTCLMS-------A 175

  Fly   207 LSQ--------DRFVDHFKETPVMSTYLLAFMVANYSARGNESEFAVLTRP-----EFYD--NTE 256
            :.|        .|.:..||:...:.:||||.:|.:...:......||...|     .||:  .||
 Worm   176 IGQGSTPSECGKRTIFSFKQPVSIPSYLLAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETE 240

  Fly   257 FSYHVGQQVVSAYGELFQSPYAELGNDVLQYASSPRFPHNGMENWGLIIYSDDVLIQEPGYSDDW 321
            ....|.:.|.        .||.....|::...::  ||..||||..|...:..:|.         
 Worm   241 KILKVAEDVA--------GPYVWGRYDLVVLPAT--FPFGGMENPCLTFITPTLLA--------- 286

  Fly   322 SDKEFAIRIIAHETSHMWFGDSVTFSWWSYFWLNEAFARYYEYFMAHQLYPDYHLDEQF------ 380
            .|:.. :.:||||.||.|.|:.||...|.:|||||.|..:.|..:..::|.:  |:.||      
 Worm   287 GDRSL-VNVIAHEISHSWTGNLVTNFSWEHFWLNEGFTVFLERKIHGKMYGE--LERQFESESGY 348

  Fly   381 ---VVRQMQLIFGTD------AQN-GTQPMTSPESEIQTPSQIAYKFSGIAYAKGACIVRMWRNL 435
               :||.:..:||.|      .|| |.   ..|:.          .||.:.|.||:.::......
 Worm   349 EEALVRTVNDVFGPDHEYTKLVQNLGN---ADPDD----------AFSSVPYEKGSALLFTIEQA 400

  Fly   436 MGAEN-FDTAIRSYLQQYH----------------------LTNTVPYNLFYH--------LFEH 469
            :|..: |:..:|.|:|:|.                      :.:.:.:||:.|        .::.
 Worm   401 LGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSFTDKKVILDNIDWNLWLHKAGLPPKPKYDS 465

  Fly   470 WPKNQDVDL-VDFLTDYTEQVGYPMIIVKALQGNKVVTVEQSRFLLNK----------------D 517
            .|.....|| ..:.|:.:|......:..|.....|:..::..|  :||                |
 Worm   466 TPMQACKDLAAKWTTEGSEAPTDGEVFAKMSNSQKLAVLDAVR--VNKTMFGDRMPALTATYKLD 528

  Fly   518 DGSNATLKYT 527
            ...||.||::
 Worm   529 QAKNAELKFS 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42335NP_732655.3 Peptidase_M1 26..425 CDD:279741 113/437 (26%)
M1_APN_2 34..492 CDD:189008 128/528 (24%)
ERAP1_C 567..874 CDD:288671
ltah-1.1NP_001023056.1 M1_LTA4H 8..453 CDD:189006 126/506 (25%)
Leuk-A4-hydro_C 468..608 CDD:312599 14/73 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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