Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001039204.1 | Gene: | pold1 / 734063 | XenbaseID: | XB-GENE-1002131 | Length: | 1109 | Species: | Xenopus tropicalis |
Alignment Length: | 1228 | Identity: | 290/1228 - (23%) |
---|---|---|---|
Similarity: | 496/1228 - (40%) | Gaps: | 307/1228 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 272 DDDENQFDVE-------KTQQTEKVSQTKTAAEKTSQSKVAEKSAPKK-----ETTGSPKESESE 324
Fly 325 DISRLLNNWESICQMDDDFEKSVLTTEQDSTISSDQQLRFWYWEAYEDPVKMPGEVFLFGRTADG 389
Fly 390 KSVCLRVQNINRVLYLLPRQFLLDPISKEPT----KQKVTVADIYKEFDSEVANQLKLEFFRSRK 450
Fly 451 VTKSFAHHAIGIEVPQSCDYLEVH-YDGKK---------PLPNLSADKKY---------NSIAHI 496
Fly 497 FGATTNALE---RFLLDRKIKGPCWLQVTG--------------FKVSPTPMSWCNTEVTLTEPK 544
Fly 545 NVELVQD--KGKPAPPPPLTLLSLNV----RTSMNPKTSRNEICMISMLTHNRFHIDRPAPQPAF 603
Fly 604 NRHMCAL-TRPAVVSWPLDLNFEMAKYKSTTVHKHDSERALLSWFLAQYQKIDADLIVTFDSMDC 667
Fly 668 QLNVITDQIVALKIPQWSRMGRLR-----------LSQSFGKRLLEHFV----GRMVCDVKRSAE 717
Fly 718 ECIRARSYDLQTLCKQVLKLKESERMEVNADDLLEMYEKGESITKLISLTMQDNSYL-LR----L 777
Fly 778 MCELNIMPLALQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDA 842
Fly 843 TLSGADATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQ------ 901
Fly 902 ----PVDADELPT---LPDSKTEPGILPLQLKRLVESRK----EVKKLMAAPDLSPELQMQYHIR 955
Fly 956 QMALKLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQ---------KMNYDVVYG 1011
Fly 1012 DTDSLMINTNITDYDQVYKIGHNIKQSVNKLY-KQLELDIDGVFGCLLLLKKKKYAAIKLSKDSK 1075
Fly 1076 GNLRREQEHKGLDIVRRDWSQLAVMVGKAVLDEVLSEKPLEEKLDAV-HAQLEKIKTQIAEGVVP 1139
Fly 1140 LPLFVITKQLTRTPQEYANSASLPHVQVALRM-NRERNRRYKKGDMVDYVICLDGTTNAAMQRAY 1203
Fly 1204 HLDELKTSED------KKLQLDTNYYLGHQIHPVVTRMVEVLEGTD------------------- 1243
Fly 1244 ---------ASRIAECLGMDPTKFRQNAQRTQRENTEQSEGESLLKTTLQLYRLCEPFR---FQC 1296
Fly 1297 VTCKTEQLMASAYRPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQR 1354 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | |
pol2 | 52..1237 | CDD:273159 | 259/1078 (24%) | ||
DNA_polB_alpha_exo | 567..789 | CDD:99819 | 51/246 (21%) | ||
POLBc_alpha | 852..1254 | CDD:99915 | 132/464 (28%) | ||
zf-DNA_Pol | 1286..1459 | CDD:286132 | 18/72 (25%) | ||
pold1 | NP_001039204.1 | PTZ00166 | 76..1105 | CDD:240301 | 280/1179 (24%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |