| Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_506017.1 | Gene: | F10C2.4 / 179652 | WormBaseID: | WBGene00008645 | Length: | 1081 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1218 | Identity: | 275/1218 - (22%) |
|---|---|---|---|
| Similarity: | 490/1218 - (40%) | Gaps: | 297/1218 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 277 QFDVEKTQQTEKVSQTKTAAEKTSQSKVAEKSAPKKETTGSPKESESED--ISRLLNNWESICQM 339
Fly 340 DDDFEKSVLTTEQDSTISSDQQLRFWYWEAYEDPVKMPGEVFLFGRTADGKSVCLRVQNINRVLY 404
Fly 405 L-LPRQFLLDPISKEPTKQKVTVADIYKEFDS----------------EVANQLKLEFFRSRKVT 452
Fly 453 KSFAHHAIGIEVPQSCDYLE---------VHYDGKKPLPNLSADKKYNSIAHIFGATTNALERFL 508
Fly 509 LDRKIKGPCWLQVTGFKV----SPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLNV- 568
Fly 569 ---RTSMNPKTSRNEICMISML----------THNRFHIDRPAPQPAFNRHMCALTRPAVVSWPL 620
Fly 621 DLNFEMAKYKSTTVHKHDSERALLSWFLAQYQKIDADLIVTFDSMDCQLNVITDQIVALKIPQWS 685
Fly 686 RMGRLR-----------LSQSFGKRLLE----HFVGRMVCDVKRSAEECIRARSYDLQTLCKQVL 735
Fly 736 KLKESERMEVNADDLLEMYEKGESIT--KLISLTMQDNSYLLRLMCELNIMPLALQITNICGNTM 798
Fly 799 TRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDATLSGADATMQTKKKAAYAGGL 863
Fly 864 VLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTV---QQPVDADELPTLPDSK------TEPG 919
Fly 920 ILPLQLKRLVESRKEVKKLMAAPDLSPE----LQMQYHIRQMALKLTANSMYGCLGFAHSRFFAQ 980
Fly 981 HLAALVTHKGREILTNTQQLVQKM------------NYDVVYGDTDSLMINTNITDYDQVYKIGH 1033
Fly 1034 NIKQSVNKLY-KQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRDWSQL 1097
Fly 1098 AVMVGKAVLDEVLSEKPLEEKLDAVHAQLEKIKTQIAE---GVVPLPLFVITKQLTRTPQEYANS 1159
Fly 1160 ASLPHVQVALRM-NRERNRRYKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSED------KKLQ 1217
Fly 1218 LDTNYYLGHQIHPVVTRMVEVLEGTDASRI---------------------------AECLGMDP 1255
Fly 1256 TKFRQNAQRTQRENTEQSEGESLLKTTLQLYRLCEPFRFQCVTCKTEQLMASAYRP-GPSNSHIA 1319
Fly 1320 VL----QQCAKS-------ECQTAPIQYL-ASVRNQLQLSMRQYVQRF 1355 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | |
| pol2 | 52..1237 | CDD:273159 | 243/1058 (23%) | ||
| DNA_polB_alpha_exo | 567..789 | CDD:99819 | 51/252 (20%) | ||
| POLBc_alpha | 852..1254 | CDD:99915 | 126/464 (27%) | ||
| zf-DNA_Pol | 1286..1459 | CDD:286132 | 21/83 (25%) | ||
| F10C2.4 | NP_506017.1 | PTZ00166 | 65..1072 | CDD:240301 | 263/1155 (23%) |
| DNA_polB_delta_exo | 274..503 | CDD:99820 | 56/263 (21%) | ||
| POLBc_delta | 551..944 | CDD:99916 | 119/436 (27%) | ||
| zf-C4pol | 981..1054 | CDD:290959 | 21/99 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0417 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||