Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001255109.1 | Gene: | pola-1 / 176544 | WormBaseID: | WBGene00012936 | Length: | 1428 | Species: | Caenorhabditis elegans |
Alignment Length: | 1547 | Identity: | 528/1547 - (34%) |
---|---|---|---|
Similarity: | 815/1547 - (52%) | Gaps: | 212/1547 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSES----PSEPRAKRQRV----DKNGRFAAMERLRQLKGTKNKCKVEDQVDDVYDVVDEREYAK 57
Fly 58 RAQEKYGDDWI-EEDGTGYAEDLRDFFED-EDEYSDGEEDRKDSKKKKGVAPNSKKRPRENEKPV 120
Fly 121 TGKASIKNLFSNAVPKK-MD---VKTSVKDDDILADILGEIKEEPAATSEKAEK--VIAPAKISV 179
Fly 180 TSRKFDAAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKK 244
Fly 245 EPMPEKTPAKKATEDPFS-----DNEMDFSCLDDDENQFDVEKTQQTEKVSQTKTAAEKTSQSKV 304
Fly 305 AEKSAPKKETTGSPKESESEDISRLLNNWE--SICQMDDDFEKSVLTTE--------QDSTISSD 359
Fly 360 QQLRFWYWEAYEDPVKMPGEVFLFGR---TADGKSVC-LRVQNINRVLYLLPRQFLLDPISKEPT 420
Fly 421 KQKVTVADIYKEFDSEVANQLKLEFFRSRKVTK------SFAHHAIGIEVPQSCDYLEVHYDGKK 479
Fly 480 PLPNLSADKKYNSIAHIFGATTNALERFLLDRKIKGPCWLQVTGFKVSPTPMSWC--NTEVTLTE 542
Fly 543 PKNVELVQDKGKPAPPPPLTLLSLNVRTSMNPKTSRNEICMISMLTHNRFHIDRPAPQPAFNRHM 607
Fly 608 CALTRPAVVSWPLDLNFEMAKYK-STTVHKHDSERALLSWFLAQYQKIDADLIVTFDSMDCQLNV 671
Fly 672 ITDQIVALKIPQWSRMGRLRLSQSFGKRLLEH--------FVGRMVCDVKRSAEECIRARSYDLQ 728
Fly 729 TLCKQVLKLKESERMEVNADDLLEMYEKGESITKLISLTMQDNSYLLRLMCELNIMPLALQITNI 793
Fly 794 CGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDK----KPVSKRSGAGDTDATLSGADATMQTK 854
Fly 855 KKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADELPTLPDSKTEPG 919
Fly 920 ILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHSRFFAQHLAA 984
Fly 985 LVTHKGREILTNTQQLVQKMNYDVVYGDTDSLMINTNITDYDQVYKIGHNIKQSVNKLYKQLELD 1049
Fly 1050 IDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRDWSQLAVMVGKAVLDEVL-SEK 1113
Fly 1114 PLEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRR 1178
Fly 1179 YKKGDMVDYVICLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTD 1243
Fly 1244 ASRIAECLGMDPTKFRQ--NAQRTQRENTEQSEGESLLKTTLQLYRLCEPFR------------- 1293
Fly 1294 ----FQCVT-CKTEQLMASAYRPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQ 1353
Fly 1354 RFYKNWLVCDHPDCNFNTRTHSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLG-- 1416
Fly 1417 --KQTLQQKPTLTPELE------QAYQLLYETVDQQLQSSSYVIISLSKLFA 1460 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | 21/59 (36%) |
pol2 | 52..1237 | CDD:273159 | 442/1233 (36%) | ||
DNA_polB_alpha_exo | 567..789 | CDD:99819 | 74/230 (32%) | ||
POLBc_alpha | 852..1254 | CDD:99915 | 216/402 (54%) | ||
zf-DNA_Pol | 1286..1459 | CDD:286132 | 45/200 (23%) | ||
pola-1 | NP_001255109.1 | DNA_pol_alpha_N | 33..89 | CDD:289058 | 20/55 (36%) |
pol2 | 48..1190 | CDD:273159 | 450/1245 (36%) | ||
DTHCT | 154..242 | CDD:285332 | 27/138 (20%) | ||
DNA_polB_alpha_exo | 520..752 | CDD:99819 | 78/238 (33%) | ||
POLBc_alpha | 810..1207 | CDD:99915 | 218/411 (53%) | ||
zf-DNA_Pol | 1232..1421 | CDD:286132 | 45/209 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167662 | |
Domainoid | 1 | 1.000 | 426 | 1.000 | Domainoid score | I308 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6802 | |
Inparanoid | 1 | 1.050 | 733 | 1.000 | Inparanoid score | I310 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1805 |
OMA | 1 | 1.010 | - | - | QHG55031 | |
OrthoDB | 1 | 1.010 | - | - | D293315at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004596 | |
OrthoInspector | 1 | 1.000 | - | - | oto20118 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102343 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45861 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R343 |
SonicParanoid | 1 | 1.000 | - | - | X3211 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.890 |