| Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_493616.1 | Gene: | pole-1 / 173368 | WormBaseID: | WBGene00009368 | Length: | 2144 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1201 | Identity: | 231/1201 - (19%) |
|---|---|---|---|
| Similarity: | 390/1201 - (32%) | Gaps: | 444/1201 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 342 DFEKSVLTTEQDSTISSDQQLRFWYWEAYEDPVKMPGEVFLFGRTADGKSVCLRVQNINRVLYLL 406
Fly 407 PR---QFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEF------FRSRK------------ 450
Fly 451 VTKSFAHHAIGIEVPQSCDYLEVHYDGKKPLPNLSADKK--------YNSIAHIFGATTNALERF 507
Fly 508 LLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLNVRTS- 571
Fly 572 ---MNPKTSRNEICMISMLTHNRFHIDRPAPQPAFNRHMCALTRPAVVSWPLDLN-FE---MAKY 629
Fly 630 -KSTTVHKHDSERALLSWFLAQYQKIDADLIVTF--DSMDCQLNVITDQIVALKIPQWSRMGRLR 691
Fly 692 LSQSFGKRLLEHFVGRMVCDVKRSAEE-----CIR--------------ARSYDLQTLCKQVLKL 737
Fly 738 KESERMEVNADDLLEMYEKGESITKLISLTMQD--NSYLLRL---------MCELNIMPLALQIT 791
Fly 792 NICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDK--------------KPVSKRSGAGDTDA 842
Fly 843 TLSG---AD----------ATMQTKKKAAYA------------------------------GGLV 864
Fly 865 LEPMRGLYEKYVLLMDFNSLYPSII------------QEYNIC---------------------- 895
Fly 896 ---------FTTVQQPVDAD--------------------ELPTLPD------SKTEPGILPLQ- 924
Fly 925 --------------LKRLVESRKEVKKLM-----------AAPDL----SPELQM-QYHIRQMAL 959
Fly 960 KLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKMNYDVVYGDTDSL-------- 1016
Fly 1017 -----------------------MINTNITD------YDQVYKIGHNIKQSVNKLYKQLELDIDG 1052
Fly 1053 VFGCLLL--------LKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRDWSQLAVMVGKAVLDEV 1109
Fly 1110 LSEKPLEEKLDAVHAQ----LEKIKTQIAEGVVPLPLFVI---TKQLTRTPQEYANSASLPHVQV 1167
Fly 1168 ALRMNRERNRRYKKGDMVD-------YVICLDGTTNAAMQRAYHLDELKT--------------- 1210
Fly 1211 ---SEDKKLQ--LDTNYYL---GHQIHPVVT 1233 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | |
| pol2 | 52..1237 | CDD:273159 | 231/1201 (19%) | ||
| DNA_polB_alpha_exo | 567..789 | CDD:99819 | 54/262 (21%) | ||
| POLBc_alpha | 852..1254 | CDD:99915 | 111/594 (19%) | ||
| zf-DNA_Pol | 1286..1459 | CDD:286132 | |||
| pole-1 | NP_493616.1 | PolB | 69..1144 | CDD:223494 | 229/1192 (19%) |
| DNA_polB_epsilon_exo | 253..455 | CDD:99822 | 52/255 (20%) | ||
| POLBc_epsilon | 516..1132 | CDD:99918 | 118/632 (19%) | ||
| DUF1744 | 1470..1869 | CDD:285663 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0417 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||