Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752562.1 | Gene: | pola1 / 100379926 | XenbaseID: | XB-GENE-1000548 | Length: | 1489 | Species: | Xenopus tropicalis |
Alignment Length: | 1482 | Identity: | 591/1482 - (39%) |
---|---|---|---|
Similarity: | 865/1482 - (58%) | Gaps: | 149/1482 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSESPS--EPRAKRQRVDKNGRFAAMERLRQLK-GTKNKCKVEDQVDDVYDVVDEREYAKRAQEK 62
Fly 63 YGDDWI-EEDGTGYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRENEKPVTGKASI 126
Fly 127 KNLF-SNAVPKKMDVKTSVKDDDILADILGEIKEE------PAATSEKAEKV---------IAPA 175
Fly 176 KISVTSRKFDAAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSP 240
Fly 241 TIKKEPMPEKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKVSQTKTAAEKTSQSKVA 305
Fly 306 EKSAPK----KETTGSPKESESEDISRLLNN--WESICQMDDDFEKSVLTTEQDST-------IS 357
Fly 358 SDQQLRFWYWEAYEDPVKMPGEVFLFGR----TADG-KSVCLRVQNINRVLYLLPRQFLLDPISK 417
Fly 418 EPTKQKVTVADIYKEFDSEVANQLKLEFFRSRKVTKSFAHHAIGIEVPQSCDYLEVHYDGKKPLP 482
Fly 483 NLSADKKYNSIAHIFGATTNALERFLLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVE 547
Fly 548 LVQDKGKPAPPPPLTLLSLNVRTSMNPKTSRNEICMISMLTHNRFHIDRPAPQPAFNRHMCALTR 612
Fly 613 PAVVSWPLDLNFEMAKYKSTTVHKHDSERALLSWFLAQYQKIDADLIVTFDSMDCQLNVITDQIV 677
Fly 678 ALKIPQWSRMGRLRLS--------QSFGKRLLEHFVGRMVCDVKRSAEECIRARSYDLQTLCKQV 734
Fly 735 LKLKESERMEVNADDLLEMYEKGESITKLISLTMQDNSYLLRLMCELNIMPLALQITNICGNTMT 799
Fly 800 RTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKR---SGAGDTDATLSGADATMQTKKKAAYAG 861
Fly 862 GLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPV-------DADELPTLPDSKTEPG 919
Fly 920 ILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMYGCLGFAHSRFFAQHLAA 984
Fly 985 LVTHKGREILTNTQQLVQKMNYDVVYGDTDSLMINTNITDYDQVYKIGHNIKQSVNKLYKQLELD 1049
Fly 1050 IDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVRRDWSQLAVMVGKAVLDEVLSEKP 1114
Fly 1115 LEEKLDAVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRY 1179
Fly 1180 KKGDMVDYVICLDGTTNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDA 1244
Fly 1245 SRIAECLGMDPTKFRQNAQRTQRENTEQSEGESLLKTTLQL-----YRLCEPFRFQCVTCKTEQL 1304
Fly 1305 MASAY-------RPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQRFYKNWLVC 1362
Fly 1363 DHPDCNFNTRTHSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFD 1414 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | 27/60 (45%) |
pol2 | 52..1237 | CDD:273159 | 501/1237 (41%) | ||
DNA_polB_alpha_exo | 567..789 | CDD:99819 | 82/229 (36%) | ||
POLBc_alpha | 852..1254 | CDD:99915 | 220/408 (54%) | ||
zf-DNA_Pol | 1286..1459 | CDD:286132 | 50/136 (37%) | ||
pola1 | XP_031752562.1 | pol2 | 59..1243 | CDD:273159 | 506/1251 (40%) |
zf-DNA_Pol | 1284..>1433 | CDD:401082 | 52/144 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 481 | 1.000 | Domainoid score | I414 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6802 | |
Inparanoid | 1 | 1.050 | 1022 | 1.000 | Inparanoid score | I283 |
OMA | 1 | 1.010 | - | - | QHG55031 | |
OrthoDB | 1 | 1.010 | - | - | D293315at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004596 | |
OrthoInspector | 1 | 1.000 | - | - | oto103153 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45861 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R343 |
SonicParanoid | 1 | 1.000 | - | - | X3211 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |