Sequence 1: | NP_536736.2 | Gene: | DNApol-alpha180 / 42553 | FlyBaseID: | FBgn0259113 | Length: | 1488 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936975.2 | Gene: | rev3l / 100145815 | XenbaseID: | XB-GENE-1012630 | Length: | 3130 | Species: | Xenopus tropicalis |
Alignment Length: | 1471 | Identity: | 302/1471 - (20%) |
---|---|---|---|
Similarity: | 543/1471 - (36%) | Gaps: | 364/1471 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 DGTGYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRENEKPVTGKASIKNLFSNAVP 135
Fly 136 KKMDVKTSVKDDDILADILGE-IKEEPAATSEKAEKV-----IAPAKISVTSRKFDAAAAKEYMN 194
Fly 195 SFLNNIKVQEQ---------------ERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKK 244
Fly 245 EPMPEKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKVSQTKTAAEKTSQSKVAEKSA 309
Fly 310 PKKETTGSPKESESEDISRLLNNWE----SICQMDDDFEKSVLTT------------EQ----DS 354
Fly 355 TISSDQQLRFWYWEAYEDPVKMPGEVFLFGRTA-DGKSVCLRVQNINRVLYLLPRQFL----LDP 414
Fly 415 ISKEPTKQKVTVADIYKEFDSEVANQLKLEFFRSRKVTKSFAHHAIGI--EVPQS-------CDY 470
Fly 471 LEVHYDGKKPLPNLSADKKYNSIAHIFGATTNALERFLLDRKIK-----------------GPCW 518
Fly 519 LQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLNV----RTSMNPKTSRN 579
Fly 580 EICMI-------SMLTH-NR--------FHIDRPAPQPAFNRHMCALTRPAVVSWPLDLNFEMAK 628
Fly 629 YKSTTVHKHDSERALLSWFLAQYQKIDADLIVTFDSMDCQLNVITDQIVALKIPQWSRMGRL--- 690
Fly 691 ----RLS---QSFGKRLLE--HFVGRMVCDVKRSAEECIRARSYDLQTLCKQVLKLKESERMEV- 745
Fly 746 NADDLLEMYEKGESITKLISLTMQDNSYL-------LRLMCELNIMPLALQITNICGNTMTRTLQ 803
Fly 804 GGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDATLSGADATMQTKKKAAYAGGLVLEPM 868
Fly 869 RGLYEKYVLLMDFNSLYPSIIQEYNICFTT--------------------VQQPVD-----ADEL 908
Fly 909 PTLPD------SKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANSMY 967
Fly 968 GCLGFAHS-RFFAQHLAALVTHKGREILTNTQQLV---QKMNYDVVYGDTDSLMINTNITDYDQV 1028
Fly 1029 YKIGHNIKQSVNKLY-KQLELDIDGVF-GCLLLLKKKKYAAIKLSKDSKGNLRREQEHKGLDIVR 1091
Fly 1092 RDWSQLAVMVGKAVLDEVLSEKPLEEKLD--AVHAQLEKIKTQIAEGVVPLPLFVITKQLTRTPQ 1154
Fly 1155 EYANSASLPHVQVALRM-NRERNRRYKKGDMVDYVICLDGTTNAAMQRAYH--LDELKTSEDKKL 1216
Fly 1217 QLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTKFRQNAQRTQRE-NTEQSEGESLLK 1280
Fly 1281 TTLQLYR--------------LCEPFRFQ---CVTCKTEQLMASAYR-----------PGPSNSH 1317
Fly 1318 IAVLQQCAKSECQTAPIQY-LASVRNQLQLS--MRQYVQRF 1355 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNApol-alpha180 | NP_536736.2 | DNA_pol_alpha_N | 24..83 | CDD:289058 | 3/11 (27%) |
pol2 | 52..1237 | CDD:273159 | 272/1319 (21%) | ||
DNA_polB_alpha_exo | 567..789 | CDD:99819 | 41/261 (16%) | ||
POLBc_alpha | 852..1254 | CDD:99915 | 117/443 (26%) | ||
zf-DNA_Pol | 1286..1459 | CDD:286132 | 19/101 (19%) | ||
rev3l | XP_002936975.2 | PTZ00166 | 41..>183 | CDD:240301 | |
DUF4683 | 746..1172 | CDD:406222 | |||
REV3L_RBD | 1882..1904 | CDD:412083 | 6/26 (23%) | ||
DNA_polB_zeta_exo | 2296..2532 | CDD:99821 | 45/268 (17%) | ||
POLBc_zeta | 2558..3006 | CDD:99917 | 128/492 (26%) | ||
zf-C4pol | 3042..3109 | CDD:405022 | 13/73 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |