DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f1 and E2f8

DIOPT Version :10

Sequence 1:NP_001262809.1 Gene:E2f1 / 42550 FlyBaseID:FBgn0011766 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_001094050.2 Gene:E2f8 / 308607 RGDID:1308091 Length:877 Species:Rattus norvegicus


Alignment Length:594 Identity:128/594 - (21%)
Similarity:205/594 - (34%) Gaps:187/594 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 SGDR------NRADTSLGILTKKFVDLLQESPDGVVD----LNEASNRLHVQKRRIYDITNVLEG 303
            |||.      :|.:.|||:|..||:....:.|:..|:    |:|.:..|:|::||||||.||||.
  Rat   102 SGDEFEKSQPSRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLES 166

  Fly   304 INILEKKSKNNIQWRCGQSMVSQERSRHIEADSLRLEQQENELNK-AIDLMRENLAEISQE---V 364
            ::::.:.:||...|          ..||....:|...:...|.|| |..:|.....|..||   :
  Rat   167 LHMVSRLAKNRYTW----------HGRHNLTKTLGTLKSVGEENKYAEQIMMIKRKEHEQEFDFI 221

  Fly   365 ENSGGMAYVTQ--------------NDLLNVDL------------FKDQ---------IVIVIKA 394
            ::.|...:|.:              :|:..|:|            .||:         :::.:.:
  Rat   222 KSCGLEDHVIKGDHVIKSTAGQNGHSDMCFVELPGVEFRAASANSRKDKSLRVMSQKFVMLFLVS 286

  Fly   395 PPE-------AKLV----------RSATALKFQPLPFNLN-LPNTKLPREIYVKAENSGEINVFL 441
            .|:       ||::          :|....|.:.|....| |.:..|.::::| .|..|....|.
  Rat   287 TPQIVSLEIAAKILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHV-TEERGRKPAFK 350

  Fly   442 CHDTSPENSPIAPGAGYVGAPGAGCVRTATSTRLHPLT-----NQRLNDPLFNNIDAMSTKGLFQ 501
            .  |.||.||...|                |:.:.|||     .|...:....|:.:...|..| 
  Rat   351 W--TGPEISPNNSG----------------SSPVMPLTASLEAEQSAKENCAKNLFSTRGKPSF- 396

  Fly   502 TPYRSARNLSKSIE-------------------EAAKQSQPEYNNICDIAMGQHHNLNQQQQQQQ 547
            |.:.|...|.||||                   |:::.|.|..|.:..:|......|.:|..:.:
  Rat   397 TRHPSLIKLVKSIENDRRKISSAPSSPVKSSKAESSQNSPPVPNKMAQLAAICKMQLEEQSSEPR 461

  Fly   548 QQLLQQ-----------PEEDDVDVELNQLVPTLTNPVVRTHQFQQHQQPSIQELFSS----LTE 597
            :::...           |.:..|:.||..|.|:|..|:        ...|.|....||    :..
  Rat   462 KRVKVNLTRSGHYKPLAPLDPAVNTELELLAPSLIQPL--------GMVPLIPSPLSSAVPVILP 518

  Fly   598 SSPPTPT----KRRREAAAAAIAAGSSTTATTTLNSHNNRNHSNHSNHSNHSSSNNSKSQPPTIG 658
            .:|..|:    .:..:|.......|.|.|...|                  .|||.:.|:.||  
  Rat   519 QAPSGPSYAIYLQPAQAQMLTPPHGLSPTVCPT------------------QSSNATGSKDPT-- 563

  Fly   659 YGSSQRRSDVPMYNCAMEGATTTSATADTTAATSRSAAASSLQMQFAAVAESNNGSSSGGGGGGG 723
                    |.|           |..||.....:|.|....|||.........|....:.|..|..
  Rat   564 --------DAP-----------TEKTATDATKSSASCRPGSLQPAPERQGAKNRSKETTGDRGTK 609

  Fly   724 GYGSIAGAG 732
            ..|::...|
  Rat   610 RTGALEDGG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f1NP_001262809.1 E2F_TDP 256..318 CDD:460530 24/65 (37%)
E2F_DD 327..444 CDD:473951 31/173 (18%)
coiled coil 327..362 CDD:271137 9/35 (26%)
E2f8NP_001094050.2 E2F_TDP 114..182 CDD:460530 25/77 (32%)
E2F_TDP 268..353 CDD:460530 15/87 (17%)
PHA03247 <503..847 CDD:223021 32/155 (21%)

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