DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f1 and E2f8

DIOPT Version :9

Sequence 1:NP_001262809.1 Gene:E2f1 / 42550 FlyBaseID:FBgn0011766 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_001094050.2 Gene:E2f8 / 308607 RGDID:1308091 Length:877 Species:Rattus norvegicus


Alignment Length:594 Identity:128/594 - (21%)
Similarity:205/594 - (34%) Gaps:187/594 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 SGDR------NRADTSLGILTKKFVDLLQESPDGVVD----LNEASNRLHVQKRRIYDITNVLEG 303
            |||.      :|.:.|||:|..||:....:.|:..|:    |:|.:..|:|::||||||.||||.
  Rat   102 SGDEFEKSQPSRKEKSLGLLCHKFLARYPKYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLES 166

  Fly   304 INILEKKSKNNIQWRCGQSMVSQERSRHIEADSLRLEQQENELNK-AIDLMRENLAEISQE---V 364
            ::::.:.:||...|          ..||....:|...:...|.|| |..:|.....|..||   :
  Rat   167 LHMVSRLAKNRYTW----------HGRHNLTKTLGTLKSVGEENKYAEQIMMIKRKEHEQEFDFI 221

  Fly   365 ENSGGMAYVTQ--------------NDLLNVDL------------FKDQ---------IVIVIKA 394
            ::.|...:|.:              :|:..|:|            .||:         :::.:.:
  Rat   222 KSCGLEDHVIKGDHVIKSTAGQNGHSDMCFVELPGVEFRAASANSRKDKSLRVMSQKFVMLFLVS 286

  Fly   395 PPE-------AKLV----------RSATALKFQPLPFNLN-LPNTKLPREIYVKAENSGEINVFL 441
            .|:       ||::          :|....|.:.|....| |.:..|.::::| .|..|....|.
  Rat   287 TPQIVSLEIAAKILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHV-TEERGRKPAFK 350

  Fly   442 CHDTSPENSPIAPGAGYVGAPGAGCVRTATSTRLHPLT-----NQRLNDPLFNNIDAMSTKGLFQ 501
            .  |.||.||...|                |:.:.|||     .|...:....|:.:...|..| 
  Rat   351 W--TGPEISPNNSG----------------SSPVMPLTASLEAEQSAKENCAKNLFSTRGKPSF- 396

  Fly   502 TPYRSARNLSKSIE-------------------EAAKQSQPEYNNICDIAMGQHHNLNQQQQQQQ 547
            |.:.|...|.||||                   |:::.|.|..|.:..:|......|.:|..:.:
  Rat   397 TRHPSLIKLVKSIENDRRKISSAPSSPVKSSKAESSQNSPPVPNKMAQLAAICKMQLEEQSSEPR 461

  Fly   548 QQLLQQ-----------PEEDDVDVELNQLVPTLTNPVVRTHQFQQHQQPSIQELFSS----LTE 597
            :::...           |.:..|:.||..|.|:|..|:        ...|.|....||    :..
  Rat   462 KRVKVNLTRSGHYKPLAPLDPAVNTELELLAPSLIQPL--------GMVPLIPSPLSSAVPVILP 518

  Fly   598 SSPPTPT----KRRREAAAAAIAAGSSTTATTTLNSHNNRNHSNHSNHSNHSSSNNSKSQPPTIG 658
            .:|..|:    .:..:|.......|.|.|...|                  .|||.:.|:.||  
  Rat   519 QAPSGPSYAIYLQPAQAQMLTPPHGLSPTVCPT------------------QSSNATGSKDPT-- 563

  Fly   659 YGSSQRRSDVPMYNCAMEGATTTSATADTTAATSRSAAASSLQMQFAAVAESNNGSSSGGGGGGG 723
                    |.|           |..||.....:|.|....|||.........|....:.|..|..
  Rat   564 --------DAP-----------TEKTATDATKSSASCRPGSLQPAPERQGAKNRSKETTGDRGTK 609

  Fly   724 GYGSIAGAG 732
            ..|::...|
  Rat   610 RTGALEDGG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f1NP_001262809.1 E2F_TDP 256..318 CDD:280479 24/65 (37%)
E2F_DD 327..444 CDD:304549 31/173 (18%)
coiled coil 327..362 CDD:271137 9/35 (26%)
E2f8NP_001094050.2 E2F_TDP 115..182 CDD:396755 25/76 (33%)
E2F_TDP 269..353 CDD:396755 14/86 (16%)
PHA03247 <503..847 CDD:223021 32/155 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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