DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f1 and E2f2

DIOPT Version :9

Sequence 1:NP_001262809.1 Gene:E2f1 / 42550 FlyBaseID:FBgn0011766 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_808401.1 Gene:E2f2 / 242705 MGIID:1096341 Length:443 Species:Mus musculus


Alignment Length:280 Identity:101/280 - (36%)
Similarity:141/280 - (50%) Gaps:36/280 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 RHDADAELDEDVVERVAKPASHHPFSLSTPQQQL-----AASVASSSSSGDRNRADTSLGILTKK 265
            |..|..:||.:.:.|...|      ...||:.:.     ..|..:..|.|::.|.|||||:||||
Mouse    84 RLPAKRKLDLEGIGRPTVP------EFRTPKGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKK 142

  Fly   266 FVDLLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCGQSMVSQ---- 326
            |:.||.||.|||:|||.|:..|.||||||||||||||||.::.||||||||| .|:.:...    
Mouse   143 FIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKKSKNNIQW-VGRELFEDPTRP 206

  Fly   327 ERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQEVENSGGMAYVTQNDLLNVDLFKDQIVIV 391
            .|.:.:..:...|...|..|::.|.....:...::::..|. .:||||..|:..|..||:|.||.
Mouse   207 SRQQQLGQELKELMNAEQTLDQLIQSCSLSFKHLTEDNANK-KLAYVTYQDIRAVGNFKEQTVIA 270

  Fly   392 IKAPPEAKLVRSATALKFQPLPFNLNLPNTKLPREIYVKAENSGEINVFLCHDTSPE-NSPIAPG 455
            :||||:.:|.....|.:        ||       :||:|: ..|.|.|:||.:...| :||....
Mouse   271 VKAPPQTRLEVPDRAEE--------NL-------QIYLKS-TQGPIEVYLCPEEGQEPDSPAKEA 319

  Fly   456 AGYVGA--PGAGCVRTATST 473
            .....|  |...|.:...||
Mouse   320 LPSTSALSPIPDCAQPGCST 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f1NP_001262809.1 E2F_TDP 256..318 CDD:280479 46/61 (75%)
E2F_DD 327..444 CDD:304549 33/116 (28%)
coiled coil 327..362 CDD:271137 5/34 (15%)
E2f2NP_808401.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Cyclin A/CDK2 binding. /evidence=ECO:0000255 67..107 6/28 (21%)
E2F_TDP 133..196 CDD:280479 47/63 (75%)
Leucine-zipper 157..178 15/20 (75%)
DEF box 162..198 27/36 (75%)
Dimerization. /evidence=ECO:0000255 199..291 25/107 (23%)
E2F_DD 207..308 CDD:271137 33/117 (28%)
coiled coil 207..242 CDD:271137 5/34 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..341 8/34 (24%)
Transactivation. /evidence=ECO:0000255 361..443
Retinoblastoma protein binding. /evidence=ECO:0000255 416..433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848246
Domainoid 1 1.000 101 1.000 Domainoid score I6922
eggNOG 1 0.900 - - E1_KOG2577
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000356
OrthoInspector 1 1.000 - - otm44132
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12081
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X977
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.800

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