DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f1 and efl-2

DIOPT Version :9

Sequence 1:NP_001262809.1 Gene:E2f1 / 42550 FlyBaseID:FBgn0011766 Length:821 Species:Drosophila melanogaster
Sequence 2:NP_001122660.1 Gene:efl-2 / 174980 WormBaseID:WBGene00001162 Length:358 Species:Caenorhabditis elegans


Alignment Length:421 Identity:107/421 - (25%)
Similarity:165/421 - (39%) Gaps:127/421 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 STPQQQLAASVASSSSSGDRNRADTSLGILTKKFVDLLQESPDGVVDLNEASNRLHVQKRRIYDI 297
            |..||....:.|::.|..:..|:..|||::|::|:.|.|.:.  |::|||.:..|::.|||:||:
 Worm    15 SEQQQHEDGAAAAAGSPKEVFRSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNISKRRVYDV 77

  Fly   298 TNVLEGINILEKKSKNNIQWRCGQSMVSQERSRHIEADSLRLEQQENELNKAIDLM-RENLAEIS 361
            .|||||:..:||..||||:| .|.:..|:|::. :||....|.|||    |.::|| |:..|.|.
 Worm    78 INVLEGLGYVEKVEKNNIRW-IGDNNNSEEQNA-LEARVEMLRQQE----KLLELMIRDAQAIIE 136

  Fly   362 QEVEN--SGGMAYVTQNDLLNVDLFKDQIVIVIKAPPEAKLVRSATALKFQPLPFNLNLPNTKLP 424
            ...|:  .....||::.|              |:...|                     ||||  
 Worm   137 LHFEDPIERPYNYVSKED--------------IRKTAE---------------------PNTK-- 164

  Fly   425 REIYVKAE----NSGEINVFLCHDTSPENSPIAPGAGYVGAPGAGCVRTATSTRLHPLTNQRLND 485
             .|.||:|    :|.||.|     |.|..|         |:... .||.....:.|.|.  ..||
 Worm   165 -SIIVKSELDTSSSFEIQV-----TDPSTS---------GSHDM-IVRNKNGVKSHALL--FTND 211

  Fly   486 PL-------FNNIDAMSTKGLFQTPYRSARNLSKSIEEAAK-QSQPEYNNICDIAMGQHHNLNQQ 542
            |.       .:::..:|::..|:|.......|::.:.:... .|.|::..               
 Worm   212 PPEYGDEEDEDDVKKLSSQKRFETSEALRVTLAEMLTDPTTISSSPKHIK--------------- 261

  Fly   543 QQQQQQQLLQQPEE-DDVDVELNQLVPTLT-------------------NPVVRTHQFQQHQQPS 587
                    |::||| |..|:|...|.|:.:                   :|      |:....|.
 Worm   262 --------LEEPEEIDTEDLETFVLPPSTSASQSNAPYLPETPGRGLFFSP------FKSLIDPC 312

  Fly   588 IQELFSSLTESSPPTPTKRRREAAAAAIAAG 618
            |...||....|.....|...|...|.|.|:|
 Worm   313 ILPSFSDDLTSGYINITTPSRATGAGAGASG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f1NP_001262809.1 E2F_TDP 256..318 CDD:280479 28/61 (46%)
E2F_DD 327..444 CDD:304549 31/123 (25%)
coiled coil 327..362 CDD:271137 13/35 (37%)
efl-2NP_001122660.1 E2F_TDP 37..99 CDD:367033 29/64 (45%)
coiled coil 105..140 CDD:271137 13/39 (33%)
E2F_DD 110..200 CDD:389902 36/146 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166498
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000356
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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