DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment InR and Ephb1

DIOPT Version :10

Sequence 1:NP_524436.2 Gene:InR / 42549 FlyBaseID:FBgn0283499 Length:2144 Species:Drosophila melanogaster
Sequence 2:NP_001097998.1 Gene:Ephb1 / 24338 RGDID:2556 Length:984 Species:Rattus norvegicus


Alignment Length:1158 Identity:248/1158 - (21%)
Similarity:409/1158 - (35%) Gaps:361/1158 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 SGLIDSLERAREFHGCTIITGTEP------LTISIKRESGAHVMDELKYGLAAVHKIQSSLMVHL 707
            ||..::|...|.:..|.:.   ||      ||..|.|.....:..|:::                
  Rat    46 SGYDENLNTIRTYQVCNVF---EPNQNNWLLTTFINRRGAHRIYTEMRF---------------- 91

  Fly   708 TYGLKSLKFFQSLTEISGDPPMDADKYALYVLDNRDLDELWGPNQTVFIRKGGVFFHFNPKLCVS 772
                 :::...||..:.|.   ..:.:.||..:          ..:|...|...|:...|.|.|.
  Rat    92 -----TVRDCSSLPNVPGS---CKETFNLYYYE----------TDSVIATKKSAFWSEAPYLKVD 138

  Fly   773 TINQLLPMLASKPKFFEKSDVGADSNGNRGSCGTAVLNVTLQSVGANSAMLNVTTKVEIGEPQKP 837
            ||        :..:.|.:.|.|                         ..::.|.|:|....|...
  Rat   139 TI--------AADESFSQVDFG-------------------------GRLMKVNTEVRSFGPLTR 170

  Fly   838 SNATIVFKDPRAFIGFVFYHMIDPYGNSTKSSDDPCDDRWKVSSPEKSGVMVLSNLIPYTNYSYY 902
            :...:.|:|               ||        .|             :.:||..:.:......
  Rat   171 NGFYLAFQD---------------YG--------AC-------------MSLLSVRVFFKKCPSI 199

  Fly   903 VRTMAISSE-LTNAESDVKNFRTNPGRPSKVTEVVATAISDSKINVTWSYLDKPYGVLTRYFIKA 966
            |:..|:..| :|.|||               |.:|                              
  Rat   200 VQNFAVFPETMTGAES---------------TSLV------------------------------ 219

  Fly   967 KLINRPTRNNNRDYCTEPLVKAMENDLPATTPTKKISDPLAGDCKCVEGSKKTSSQEYDDRKVQA 1031
              |.|.|...|.:....|:......|.....|        .|.|.|                 :|
  Rat   220 --IARGTCIPNAEEVDVPIKLYCNGDGEWMVP--------IGRCTC-----------------KA 257

  Fly  1032 GMEFENALQNFIFVPNIRKSKNGSSDKSDGAEGAALDSNAIPNGGATNPSRRRRDVALEPELDDV 1096
            |.|.||::.       .:....|:...|..|||.:...:...:....:|....|......:.|..
  Rat   258 GYEPENSVA-------CKACPAGTFKASQEAEGCSHCPSNSRSPSEASPICTCRTGYYRADFDPP 315

  Fly  1097 EGSVLL-----RHVRSITDDTDAFFEKDDENTYKDEEDLSSNKQFYEVFAKELPPNQ-------- 1148
            |.:...     |:|.||.::|....|..........:|::     |.:..|:...::        
  Rat   316 EVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVT-----YNIICKKCRADRRSCSRCDD 375

  Fly  1149 -THFVFEKLRHFTRYAIFVVACREEIPS-----------EKLRDTSFKKSLCSDYDTVFQTTKRK 1201
             ..||..:|.        :..||..|.|           :.:...|.|......:.:|..||.:.
  Rat   376 NVEFVPRQLG--------LTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQA 432

  Fly  1202 KFADIVMDLKVDLEHANNTESPVRVRWTPPVDPNGEIVTYEVAYKLQKPDQVEEKKCIPAADFNQ 1266
            ..:.:.:     :...:.|...:.:.|..|..|||.|:.||:.|..::.::..........:..:
  Rat   433 APSTVPI-----MHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTAR 492

  Fly  1267 TAGYLIKLNEGL-YSFRVRANSIAGYGDFTEVEHIKVEPPPSYAKVFFWLL-------------- 1316
            ..|    |..|: |..:|||.::||||.|:             .|:.|..|              
  Rat   493 IDG----LRPGMVYVVQVRARTVAGYGKFS-------------GKMCFQTLTDDDYKSELREQLP 540

  Fly  1317 ------GIGLAFLIVSL--FGYVC----YLHKRKVPSNDLH----------MNTEVNPFYASMQY 1359
                  ..|:.| :|||  ...||    ...|..|.|:.|.          |...::||     .
  Rat   541 LIAGSAAAGVVF-VVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPF-----T 599

  Fly  1360 IPDDWEVLRE-------NIIQLAP-LGQGSFGMVYEGILKSFPPNGVDRECAIKTVNENATDRER 1416
            ..|..|.:||       :.:::.. :|.|.||.||:|.||.  |...:...||||:....::::|
  Rat   600 YEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKL--PGKREIYVAIKTLKAGYSEKQR 662

  Fly  1417 TNFLSEASVMKEFDTYHVVRLLGVCSRGQPALVVMELMKKGDLKSYLRAHRPEERDEAMMTYLNR 1481
            .:||||||:|.:||..:::||.||.::.:|.:::.|.|:.|.|.|:||      :::...|.:..
  Rat   663 RDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLR------QNDGQFTVIQL 721

  Fly  1482 IGVTGNVQPPTYGRIYQMAIEIADGMAYLAAKKFVHRDLAARNCMVADDLTVKIGDFGMTR---D 1543
            :|               |...||.||.||:...:|||||||||.:|..:|..|:.|||::|   |
  Rat   722 VG---------------MLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQD 771

  Fly  1544 IYETDYYRKGTKGLLPVRWMPPESLRDGVYSSASDVFSFGVVLWEMATLAAQPYQGLSNEQVLRY 1608
            ......|.....|.:||||..||::....::|||||:|:|:|:||:.:...:||..:||:.|:..
  Rat   772 DTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINA 836

  Fly  1609 VIDGGVMERPENCPDFLHKLMQRCWHHRSSARPSFLDIIAYLEPQCPN-SQFKEVSFYHSEAGLQ 1672
            :.....:..|.:||..||:||..||....::||.|.:|:..|:....| :..|.|:         
  Rat   837 IEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVA--------- 892

  Fly  1673 HREKERKERNQLDAFAAVPLDQDLQDRE--------QQEDATTPLRMGDYQQN 1717
                         ...||| .|.|.||.        ..:|..:.::|..|:.:
  Rat   893 -------------TITAVP-SQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDS 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
InRNP_524436.2 Recep_L_domain 356..465 CDD:460032
Furin-like 510..645 CDD:395614
Recep_L_domain 663..781 CDD:460032 21/123 (17%)
FN3 791..>964 CDD:442628 22/173 (13%)
FN3 1224..1302 CDD:238020 21/78 (27%)
PTKc_InsR_like 1364..1652 CDD:173625 102/298 (34%)
Ephb1NP_001097998.1 EphR_LBD_B1 20..195 CDD:198444 39/254 (15%)
fn3 326..412 CDD:394996 16/98 (16%)
fn3 435..518 CDD:394996 21/91 (23%)
EphA2_TM 542..616 CDD:464211 18/79 (23%)
PTKc_EphR_B 614..882 CDD:173638 99/290 (34%)
SAM_EPH-B1 908..975 CDD:188950 3/24 (13%)
PDZ-binding. /evidence=ECO:0000255 982..984
Blue background indicates that the domain is not in the aligned region.

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