DRSC/TRiP Functional Genomics Resources

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Protein Alignment InR and ntrk1

DIOPT Version :10

Sequence 1:NP_524436.2 Gene:InR / 42549 FlyBaseID:FBgn0283499 Length:2144 Species:Drosophila melanogaster
Sequence 2:XP_002939035.2 Gene:ntrk1 / 100489637 XenbaseID:XB-GENE-923001 Length:808 Species:Xenopus tropicalis


Alignment Length:643 Identity:190/643 - (29%)
Similarity:271/643 - (42%) Gaps:175/643 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1108 ITDDTDAFFEKDDENTYKDEEDL-------SSNKQFYEVFAKEL-PPNQTHFVFEKLRHFTRYAI 1164
            |..:.|::.|....|..:.|..|       ..||:.....|:.: .|::.|.....|     :..
 Frog   237 IVPEMDSYTEIGQSNGSETEIFLPLFNISPGFNKRNVTCRAENMVGPSEEHVQINVL-----FPA 296

  Fly  1165 FVVACREEIPSEKLRDTSFKKSLCSDYDTVFQTTKRKKFADIVMDLKVDLEHANNTESPVRVRWT 1229
            .|||..|.||         :...|..| ||....|.:                        :|| 
 Frog   297 MVVALEEAIP---------QHHFCFPY-TVDGNPKPE------------------------IRW- 326

  Fly  1230 PPVDPNGEIVTYEVAYKLQKPD-----QVEEKKCIPAADFNQTA--G--YLIK---LNEGLYSFR 1282
               ..||        :.|:..|     .|||.:       |.||  |  ||.|   :|.|.|:..
 Frog   327 ---QFNG--------HNLEMNDYIYLKTVEESE-------NSTAIHGCLYLNKPTHVNNGNYTIL 373

  Fly  1283 VRANSIAGYGD------------FTEVEHIKVEPPP------SYA--------KVFFWLLGIGLA 1321
            | .|.:....:            |...|.|.|...|      :|.        ..|...:.:|||
 Frog   374 V-WNMLGSASETVYSKFMDNPFSFNPEEPIPVSLSPEGGGNSTYTTTVETVEENTFGVSVAVGLA 437

  Fly  1322 -----FLIVSLFGY-VCYLHKR--------KVPSNDL-----HMNTEVNP--------------F 1353
                 ||::.|... .|..|.:        ....:||     .||...:|              |
 Frog   438 VFACLFLLLILIALNKCGRHSKFGINRAAVLAQEDDLAMSLHFMNFGTSPLTSAEGKLDGMKPNF 502

  Fly  1354 YASMQYIPDD--WEVLRENIIQLAPLGQGSFGMVYEGILKSFPPNGVDRECAIKTVNENATDRER 1416
            ..:.||..|.  ..:.|.:|:....||:|:||.|:.....:..|.......|:|.:.| ||:..|
 Frog   503 IENPQYFCDACVQHIKRRDIVLKWELGEGAFGKVFLAEFYNLTPENEKTLVAVKALKE-ATENAR 566

  Fly  1417 TNFLSEASVMKEFDTYHVVRLLGVCSRGQPALVVMELMKKGDLKSYLRAHRPEERDEAMMTYLNR 1481
            .:|..||.::......|:|:..|||:.|:|.::|.|.||.|||..:||:|.|:.          :
 Frog   567 QDFQREAELLTVLQHEHIVKFYGVCTDGEPLIMVFEYMKHGDLNRFLRSHGPDA----------K 621

  Fly  1482 IGVTGNVQPPTYGRI-----YQMAIEIADGMAYLAAKKFVHRDLAARNCMVADDLTVKIGDFGMT 1541
            |...||.||  ||::     .|:|.:||.||.|||:..|||||||.|||:|.::|.||||||||:
 Frog   622 ILDNGNGQP--YGQLNLTQMLQIASQIASGMVYLASLHFVHRDLATRNCLVGNNLVVKIGDFGMS 684

  Fly  1542 RDIYETDYYRKGTKGLLPVRWMPPESLRDGVYSSASDVFSFGVVLWEMATLAAQPYQGLSNEQVL 1606
            ||||.|||||.|.:.:||:|||||||:....:::.||::||||||||:.|...||:..|||.:.:
 Frog   685 RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 749

  Fly  1607 RYVIDGGVMERPENCPDFLHKLMQRCWHHRSSAR-----------------PSFLDII 1647
            ..:..|..:|||..||..::.:||.||......|                 |.:|||:
 Frog   750 ECITQGRQLERPRTCPTEVYNIMQGCWQREPQQRLNIKEIHNKLQALVKAPPVYLDIL 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
InRNP_524436.2 Recep_L_domain 356..465 CDD:460032
Furin-like 510..645 CDD:395614
Recep_L_domain 663..781 CDD:460032
FN3 791..>964 CDD:442628
FN3 1224..1302 CDD:238020 24/101 (24%)
PTKc_InsR_like 1364..1652 CDD:173625 122/306 (40%)
ntrk1XP_002939035.2 LRR_8 97..156 CDD:404697
leucine-rich repeat 99..122 CDD:275378
leucine-rich repeat 123..145 CDD:275378
LRRCT_2 157..201 CDD:465313
Ig 211..292 CDD:472250 11/54 (20%)
Ig strand B 220..224 CDD:409353
Ig strand C 233..237 CDD:409353 190/643 (30%)
Ig strand E 257..261 CDD:409353 1/3 (33%)
Ig strand F 272..277 CDD:409353 0/4 (0%)
Ig strand G 285..288 CDD:409353 0/2 (0%)
Ig 295..390 CDD:472250 32/148 (22%)
Ig strand B 310..314 CDD:409353 1/3 (33%)
Ig strand C 323..327 CDD:409353 2/31 (6%)
Ig strand E 355..359 CDD:409353 1/3 (33%)
Ig strand F 369..374 CDD:409353 1/4 (25%)
Ig strand G 382..385 CDD:409353 0/2 (0%)
PTKc_TrkA 516..795 CDD:270674 118/291 (41%)
Blue background indicates that the domain is not in the aligned region.

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