DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and HAT2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_199548.1 Gene:HAT2 / 834784 AraportID:AT5G47370 Length:283 Species:Arabidopsis thaliana


Alignment Length:180 Identity:46/180 - (25%)
Similarity:71/180 - (39%) Gaps:40/180 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 LDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDP 517
            |:||....|.|...|      |:.          ..|.:.|:...|:|.......|::.:.:..|
plant    27 LNPNSSLSNNLQRLP------WNQ----------TFDPTSDLRKIDVNSFPSTVNCEEDTGVSSP 75

  Fly   518 SSETDSKKGGSRN-GDGKSGGGGGG-----------------------GSKPRRARTAFTYEQLV 558
            :|...|...|.|: .:|.||.|.|.                       |.:..|.:...:.:|..
plant    76 NSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSA 140

  Fly   559 SLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMD 608
            .||..||....|:..::|.||..|:||..||::||||||.:.|.:...:|
plant   141 FLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVD 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 21/55 (38%)
HAT2NP_199548.1 HD-ZIP_N 8..91 CDD:461370 17/79 (22%)
HOX 129..183 CDD:197696 21/53 (40%)
HALZ 185..228 CDD:128634 1/6 (17%)

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