DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and hmx3

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:322 Identity:79/322 - (24%)
Similarity:112/322 - (34%) Gaps:102/322 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 EDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSA-------STSASSDRDAATKRLAFSVENILDP 455
            |.||..:..:|.        |:.|.....||.|       .|......|.|    ||::..:.|.
 Frog     7 ESSNPPAKESPF--------SIKSLLTCEPSRAVRPHKALFTPIKGALDGA----AFALSPLTDL 59

  Fly   456 NKFTGNKLPSGPFGHPRQ-------WSY-------------------------------ERD--- 479
            . |...::|:..|..|..       |.|                               |||   
 Frog    60 T-FPRLEIPAQRFALPAHYLERSPAWWYSYTLAHGGHTPRTEVPDKSLLLGPTSPVSGGERDSPE 123

  Fly   480 --EEMQERLDDDQSEDMSAQDL----NDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGG 538
              ..::..|:...||..|.:::    ::.::....|.|.|........|.|.             
 Frog   124 PIHPLKAELEAKDSESKSPEEIILEESEPEEGKKDDSGEDWKKREESPDKKP------------- 175

  Fly   539 GGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 603
                .:.::.||.|:..|:..||:.|...||||..||..||.||.||||||||||||||.|||:|
 Frog   176 ----CRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 236

  Fly   604 NPG-------------MDVNSPTIPPPGGGSFGPGAYASGLLYSHAV---PYPPYGPYFHPL 649
            ...             ..|..|.:......|....:.|:.:..|..:   |:|.|  |.||:
 Frog   237 LAAELEAANLSHAAAQRIVRVPILYHENSSSAESASSAANVPVSQPLLTFPHPVY--YSHPV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 33/55 (60%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 12/102 (12%)
Homeodomain 179..235 CDD:459649 33/55 (60%)

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