DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and Nkx1-1

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:497 Identity:142/497 - (28%)
Similarity:185/497 - (37%) Gaps:178/497 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 PHPHPHPSAVFHLRAPSSSSTAPPSPATS-----------PLSP----------PTSPAMHSDQQ 271
            |.|.|.|          .|..|||:||.:           |:.|          .|.||:.....
Mouse    16 PPPPPGP----------GSGPAPPAPAATARDTMDGRAELPIFPRAGVPPLAASDTVPAVPEGAG 70

  Fly   272 MSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIK--LVAAVAARTTQASSTSALASASNSVSNA 334
            .:.|.|||:....|     ...:..|:..:..|.:  |:..|...|....:.:           |
Mouse    71 AARPAAPPRPTSFS-----VLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPA-----------A 119

  Fly   335 SISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDED 399
            .:::..:|..||..        .::...|:||...|||                           
Mouse   120 CVAVPAASGRSPRA--------ELERRALSAATGVAAA--------------------------- 149

  Fly   400 SNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLP 464
                                   |.|.|:||..|..:|...|              |.::.    
Mouse   150 -----------------------AGAEPTSAGDSYRADEAEA--------------NGYSS---- 173

  Fly   465 SGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQ-----------DDMCDDGSDIDDPS 518
                |..|..:.:.::|..|  |:|:.|....||....::           ...|...::::...
Mouse   174 ----GSGRSPTADSEDEAPE--DEDEEEAPEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASP 232

  Fly   519 SETDSKKGGSRNGDGKSG------GGGGGGS-----------------------KPRRARTAFTY 554
            .:..:..|...|..|..|      |.|..||                       |||||||||||
Mouse   233 VDDTAAPGPRGNSPGAPGPPATATGAGSAGSTPQGAAVTTKPKRKRTGSDSKSGKPRRARTAFTY 297

  Fly   555 EQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSPTIPPPGG 619
            ||||:||||||.||||||||||||||||||||||||||||||||||||||||.|.::||   .||
Mouse   298 EQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPT---GGG 359

  Fly   620 GSFGPGAYASGLLYSHAVPYPPYGPYFHPLGAH----HLSHS 657
            |..||||.....|.....|..|..|...||..|    :.:||
Mouse   360 GGPGPGAGPGAGLPGGLSPLSPSPPMGAPLALHGPAGYPAHS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 49/51 (96%)
Nkx1-1NP_035450.1 Homeobox 292..344 CDD:278475 49/51 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I6073
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto94550
orthoMCL 1 0.900 - - OOG6_109243
Panther 1 1.100 - - O PTHR24340
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2564
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.800

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