Protein Alignment slou and Vax2

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_072159.2
• Gene: Vax2 / 64572
• RGDID: 621133
• Length: 292
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 82/317 - (25%)
• Similarity: 103/317 - (32%)
• Gaps: 127/317 - (40%)

  Fly   466 GPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETD-SKKGGSR 529
            |..|..|....:|.||...| ...:.|...|:||.       .|.||......:.|. |...|||
  Rat     2 GDGGAERDRGPKRREEPGGR-SGCRGEHRGAEDLR-------ADTGSTSPREIAGTSASSPAGSR 58

  Fly   530 NGDGKSGGGGGGG----------------------------SKPRRARTAFTYEQLVSLENKFKT 566
            ...|.|.|....|                            .:|:|.||:||.|||..||.:|:.
  Rat    59 ESGGDSDGQQALGETDHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQR 123

  Fly   567 TRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN--------------------------- 604
            .:|:...||..||..|:|:|||||:||||||||.||..
  Rat   124 CQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNVLRLLEQ 188

  Fly   605 ---------PGMDVNSPTIPPPGGGSFG----------------PGAYASGLLYSHAVPYPPYGP 644
                     |.:...||.:|....|..|                |.|.||.       |.||
  Rat   189 GRLLSVPRAPSLLALSPGLPGLTAGHRGTSLGDPRNSSQRLNPMPSASASS-------PLPP--- 243

  Fly   645 YFHPLGAHHLSHSHSXNCKMQQRLLQLFEKRGRAVAGGAGPAA---GSGSVDPKDKM 698
               ||.|         .|.....||.|             ||:   ||.:.:|..::
  Rat   244 ---PLPA---------VCFSAAPLLDL-------------PASYKLGSSAFEPYSRL 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	31/55 (56%)
Vax2	NP_072159.2	vax upstream domain	74..101		0/26 (0%)
		homeobox	102..161		34/58 (59%)
		Homeodomain	103..159	CDD:459649	31/55 (56%)
		vax downstream domain	182..193		0/10 (0%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..241		6/35 (17%)
		vax terminal domain	266..274		2/7 (29%)