DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slou and hmx3a

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:218 Identity:74/218 - (33%)
Similarity:95/218 - (43%) Gaps:38/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 DLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHP------R 472
            :|..|.:..:...|..|.|.|..|.       :||:..:.:.| |...:||:..|..|      .
Zfish    21 NLLNSDSKPSKPKPILAPTKAGLDG-------SFSLSQVGEIN-FPRFELPTQRFALPAYLERAS 77

  Fly   473 QWSY------------------ERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSS 519
            .|.|                  .||.......|.|..|.:...|.:..|.:|....|.:|....|
Zfish    78 AWWYPYTLSASAHLHRTEAAQKARDSSPTTGTDRDSPELVLKSDPDAKDDEDDNKSGDEIVLEES 142

  Fly   520 ET-DSKKGGSRNGDGKSGGGGGGGSKP---RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLAL 580
            :| |.||.||.:...||  ..|...||   ::.||.|:..|:..||:.|...||||..||..||.
Zfish   143 DTEDGKKEGSIDDWKKS--DDGADKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAA 205

  Fly   581 SLSLTETQVKIWFQNRRTKWKKQ 603
            ||.||||||||||||||.|||:|
Zfish   206 SLHLTETQVKIWFQNRRNKWKRQ 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 33/55 (60%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 22/77 (29%)

Return to query results.
Submit another query.