Protein Alignment slou and msx2a

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001025440.1
• Gene: msx2a / 573620
• ZFINID: ZDB-GENE-980526-322
• Length: 257
• Species: Danio rerio
• Alignment Length: 286
• Identity: 80/286 - (27%)
• Similarity: 111/286 - (38%)
• Gaps: 85/286 - (29%)

  Fly   415 LTRSV---NSSAAANPSSASTSASSD-----RDAATKRLAFSVENILDPNKFTGNKLPSGPFGHP 471
            ||::|   :...:||..|..:|...|     |...|:.|.|||:.::...:
Zfish     3 LTQNVGIFSGMISANHKSKVSSDEDDDDHGSRSVRTQSLPFSVDALMSTKE-------------- 53

  Fly   472 RQWSYERDEEMQERL--DDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGK 534
            |..|..|......|:  .||:|....:.|.....:... :|.|.|:.|...|..:
Zfish    54 RSESTSRGSIHMTRIINQDDRSIYSDSVDFTKRCESAK-EDSSWINKPRLSTSPR---------- 107

  Fly   535 SGGGGGGGSKP-----------RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQ 588
                   ...|           |:.||.||..||::||.||:..:|||:.||...:.||||||||
Zfish   108 -------SQSPTICPLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQ 165

  Fly   589 VKIWFQNRRTKWKK----------------QNPGMDVNSPTIPPPG------GGSFGPGAYASGL 631
            |||||||||.|.|:                .:||:.:..|....|.      |.||.
Zfish   166 VKIWFQNRRAKAKRLQEAELERFKMASKPILHPGLTLPFPLCTQPQTAALVCGQSFP-------- 222

  Fly   632 LYSHAVPYPPYGPYFHPLGAH--HLS 655
            ...|.:|:.|.|.|..|:|..  |||
Zfish   223 FSRHMLPFAPIGIYSTPMGYSMCHLS 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	34/55 (62%)
msx2a	NP_001025440.1	Homeodomain	123..179	CDD:459649	34/55 (62%)