DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and barx1

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001020120.1 Gene:barx1 / 553644 ZFINID:ZDB-GENE-050522-28 Length:248 Species:Danio rerio


Alignment Length:103 Identity:43/103 - (41%)
Similarity:58/103 - (56%) Gaps:22/103 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 DPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLAL 580
            ||.::..||.                 .|.||:||.||..||:.||.:|:..:|||..:|::||.
Zfish   123 DPGADAVSKT-----------------KKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 170

  Fly   581 SLSLTETQVKIWFQNRRTKWKK---QNPGMDVNSPTIP 615
            ||.|::.|||.|:||||.||||   |..|::  |||.|
Zfish   171 SLGLSQLQVKTWYQNRRMKWKKIVLQGGGLE--SPTKP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 30/55 (55%)
barx1NP_001020120.1 Homeodomain 136..192 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..248 5/12 (42%)

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