DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and pou2f3

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_005172050.1 Gene:pou2f3 / 553427 ZFINID:ZDB-GENE-060512-299 Length:399 Species:Danio rerio


Alignment Length:469 Identity:95/469 - (20%)
Similarity:135/469 - (28%) Gaps:199/469 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 PH---SHQHPH-----PHP-------HPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPA 265
            ||   ||:..|     |.|       .|..||.|..|.          .|.|..:||.|...|.|
Zfish    38 PHSGSSHKTCHLTQGSPLPPGQLTGEMPSLHPLPQLVL----------MPGSHLSSPSSFLLSQA 92

  Fly   266 MHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNS 330
            ....|.:|  :.||.   ..|.|.|.|....|....|          |.|.||...|.||.:|  
Zfish    93 QSGHQGLS--LLPPN---LLSLPSQTQTGLLPHQPGL----------ALTPQAMGRSGLAGSS-- 140

  Fly   331 VSNASISISN----SSSGSPSG--RDLSDY-----GF---RIQLG------GLAAAAAAAAATSR 375
             .:..:.:|:    ...|||..  .||.:.     .|   ||:||      ||    |.......
Zfish   141 -MDGHLDMSHLQVPKHVGSPQDEPNDLEELEQFAKAFKQRRIKLGFTQGDVGL----AMGKLYGN 200

  Fly   376 QIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPV-DLTRSVNSSAAANPSSASTSASSDRD 439
            ..:..|.:|   .|.||:            |..::|.: .|.....|.|..:||...|:.::   
Zfish   201 DFSQTTISR---FEALNL------------SFKNMCKLKPLLEKWLSDAENSPSDTMTNTTT--- 247

  Fly   440 AATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQ 504
                                   ||                                        
Zfish   248 -----------------------LP---------------------------------------- 249

  Fly   505 DDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRY 569
                        |..|                    |..:.|:.||:......::||.:|.....
Zfish   250 ------------PLME--------------------GYGRKRKKRTSIETNIKLTLEKRFLDNPK 282

  Fly   570 LSVCERLNLALSLSLTETQVKIWFQNRRTKWKK--------------QNPGMDVNSPTIPP--PG 618
            .:..|...::..|::.:..|::||.|||.|.|:              .||.:...|.:..|  .|
Zfish   283 PNSEEITLISEQLAMEKEVVRVWFCNRRQKEKRIYCPVSTSPIKPHNFNPRLPSTSRSFSPLTSG 347

  Fly   619 G--GSFGPGAYASG 630
            |  .|..||:.:.|
Zfish   348 GVSSSSSPGSPSRG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 14/51 (27%)
pou2f3XP_005172050.1 POU 161..235 CDD:197673 19/92 (21%)
Homeobox 261..314 CDD:278475 14/52 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I5492
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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