Protein Alignment slou and barhl1a

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001017712.3
• Gene: barhl1a / 550407
• ZFINID: ZDB-GENE-050417-212
• Length: 299
• Species: Danio rerio
• Alignment Length: 330
• Identity: 94/330 - (28%)
• Similarity: 133/330 - (40%)
• Gaps: 93/330 - (28%)

  Fly   404 SHSTPSVC--------PVDLT-RSVNSSAAANPSSASTSASSDRDAATKRL-AFSVENIL----D 454
            ||...|.|        |.:|: ||...|..::|  .|...||..||..:|. |..:::.|    .
Zfish    16 SHRASSPCMSKGECRSPAELSPRSDLDSGCSSP--PSPRRSSVEDAVHRRARALGLDSPLQISQQ 78

  Fly   455 PNKFTGNKL------------PSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDM 507
            |...|.:.|            ...|:....| |.:..|:..::|..:.|.|...:..::.|:
Zfish    79 PRTVTSSFLIRDILADCKPLAACAPYSSTGQ-SAQDAEDCMDKLHSNSSSDSEYRVKDEADR--- 139

  Fly   508 CDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSV 572
             :..|..|.|:|..                     .|||:||||||..||..||..|:..:||||
Zfish   140 -EISSSRDSPNSRL---------------------KKPRKARTAFTDHQLAQLERSFERQKYLSV 182

  Fly   573 CERLNLALSLSLTETQVKIWFQNRRTKWKKQNP-GMDVNSPT---------IPPPGGGSFGPGAY 627
            .:|:.||.||:||:||||.|:||||||||:|.. |:::.:..         .|.|   .|.|.:.
Zfish   183 QDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSP---YFYPQSL 244

  Fly   628 ASGL-----LYSHAVPYPPYGPYFHPLGAHHLSHSHSXNCKMQQRLLQLFEKRGRAVAGGAGPAA 687
            .|.|     ||.:..|..|..|...||....|.|                     .:.||..||:
Zfish   245 VSNLDPGPGLYLYRGPSAPPPPVQRPLVPRILLH---------------------GLQGGGDPAS 288

  Fly   688 GSGSV 692
            .||.:
Zfish   289 LSGVI 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	35/55 (64%)
barhl1a	NP_001017712.3	None