Protein Alignment slou and nkx3.3

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 261
• Identity: 74/261 - (28%)
• Similarity: 105/261 - (40%)
• Gaps: 87/261 - (33%)

  Fly   441 ATKRLAFSVENILDPNKFTGNKLPSGPFGHP--RQWSYERDEEMQERLDDDQSE------DMSAQ 497
            |..|.:||:.|||:.             ||.  :..|::.:.|.::|..|..|.      ..|||
Zfish     2 ANNRTSFSIHNILNQ-------------GHECGKNGSFDEEYEGEKRTQDSGSSVPVNRGAESAQ 53

  Fly   498 D--------LNDMDQDD-MCDDGSDIDDPS------SETDSKKGGSRNGDGKSGGGGGGGSKPRR 547
            .        |..:..|. .|::.|..:|.|      .|.|.:|..|.:.:..:     ..|..:|
Zfish    54 TRISSCVLVLESLSSDQHSCEEESTGEDNSLERRHDHEMDQQKPQSCSFEDSN-----PKSSKKR 113

  Fly   548 ARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGM----- 607
            :|.||::.|:..||.:|...||||..||.:||.:|.||||||||||||||.|.|::....
Zfish   114 SRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQMAAELATT 178

  Fly   608 -------------------------DVNSPTIPPPGGGSFGPGAYASGLLYSHAVPYPPYGPYFH 647
                                     |:.||::||               || .:.||.||...|.
Zfish   179 PTTTLAKRVAVKVLVRNDQRQYNTEDLPSPSVPP---------------LY-QSFPYYPYMFCFQ 227

  Fly   648 P 648
            |
Zfish   228 P 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	32/55 (58%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	32/55 (58%)