DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and gbx2.2

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001011472.1 Gene:gbx2.2 / 496963 XenbaseID:XB-GENE-852624 Length:340 Species:Xenopus tropicalis


Alignment Length:405 Identity:110/405 - (27%)
Similarity:148/405 - (36%) Gaps:120/405 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 SAVFH-----LRAPSSSSTA---------PPSPATS-------PLSPPTSPAMHSDQQMSPPIAP 278
            ||.|.     ::.|..||||         ||.|:..       |:..|..|.      :.||  |
 Frog     2 SAAFQPPLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPV------ILPP--P 58

  Fly   279 PQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSS 343
            |..||..||...|..:  ||.....:|.        :..::..|:||......|....|:.    
 Frog    59 PPPPPSLSQATLQPTL--PSAHPHHQIP--------SLPSAFCSSLAQGMALTSTLMASLP---- 109

  Fly   344 GSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTP 408
                             ||.:|:|....|..:..|.:.:...:.|:     |...|..||:.:  
 Frog   110 -----------------GGFSASAQHQKAVRKFGAQSLHGAFEKSK-----GGQSDEEDGNKT-- 150

  Fly   409 SVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSG--PFGHP 471
                     .:.......|.|||                  |..|.|.:..| |..||  ..|..
 Frog   151 ---------YITKEGTLLPFSAS------------------EASLGPVRGQG-KEESGKEAEGKG 187

  Fly   472 RQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSG 536
            ::.||..|.::....||:.|                |......||...|:......|.|.:..|.
 Frog   188 KEDSYLMDSDLDYSSDDNIS----------------CQTAHKEDDTPEESPPNSNPSNNSNTSST 236

  Fly   537 GGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 601
            |      |.||.|||||.|||:.||.:|...:|||:.||..:|..|.|:|.||||||||||.|||
 Frog   237 G------KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHVLKLSEVQVKIWFQNRRAKWK 295

  Fly   602 KQNPGMDVNSPTIPP 616
            :...| :|||.|..|
 Frog   296 RVKAG-NVNSKTGEP 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 34/55 (62%)
gbx2.2NP_001011472.1 Homeodomain 240..296 CDD:459649 34/55 (62%)

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