DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and LOC4576841

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_001230938.4 Gene:LOC4576841 / 4576841 VectorBaseID:AGAMI1_003921 Length:540 Species:Anopheles gambiae


Alignment Length:580 Identity:135/580 - (23%)
Similarity:189/580 - (32%) Gaps:226/580 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RSQSPPASVGS-----VSFSSPAQQRKLLELNAVRHLARPEPL--QHPHAALLQQHPHLLQNPQF 194
            |:.|||....|     :|..||:                |.|:  :..|.|.| .|||.|     
Mosquito    15 RTSSPPPPCSSPAGSEISVGSPS----------------PPPIGSESAHPAHL-PHPHPL----- 57

  Fly   195 LAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPL- 258
               |..|:.||               ||..||| ||| ||:|: |..|..|:..|......:|| 
Mosquito    58 ---AVTHLVHH---------------HPLVHPH-HPH-HPAAL-HAHAAVSALQARAEDYFTPLK 101

  Fly   259 --------------SPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVA 309
                          |||......|..:.|.|..|                               
Mosquito   102 RLRMVEGGSGVELASPPGGSPKESTSRGSSPTTP------------------------------- 135

  Fly   310 AVAARTTQASSTSALASASNSVSNA---------SISISNSSSGSPSGRDLSDYGFRIQLGGLAA 365
                 ...|||.:.:.|.:||.::|         |.:.:..||||.:...:..:.....||..|.
Mosquito   136 -----INSASSANTVTSPNNSGNSATTLTTSTTTSSNTTKPSSGSTAAEGVKSFSIADILGRDAE 195

  Fly   366 AAAAAAA---TSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANP 427
            ||:...|   :...|..|.:..|.:...|::.|:..                   :.:.:||.:.
Mosquito   196 AASREGAREPSPPPINPALHHASLSHHHLHLTGHHP-------------------AAHLAAAHHH 241

  Fly   428 SSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYER------DEEMQERL 486
            .....|:|:.:.||:|        |:.|.......:|..||..|....||.      .:::||..
Mosquito   242 HHHHHSSSTLQQAASK--------IVRPWDHLRGPIPVRPFLPPALLHYEHRLALDYHQQLQEHF 298

  Fly   487 DDDQSEDMSAQDLNDMDQD----------------DMCDD----GSDIDDPSSETDSKKG----- 526
                  ...||.|..|..|                |.|..    |||.....|...|..|     
Mosquito   299 ------RAQAQLLRHMSMDIIPSESGSERSSSAASDCCSPEIGRGSDHQSHQSSQSSSSGVGGGS 357

  Fly   527 -GSRNGDGKSGGGGG------GGS----------------------------------------- 543
             |:.:|.|:||..||      .||                                         
Mosquito   358 AGAGDGSGRSGANGGASGAAKSGSKTAPNGTPLDALFQMTNKNFDESNEDSEQSHLNLFANRPQP 422

  Fly   544 -KPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 602
             |.|::|||||..|:..||.:|...:|||..:|..:|.:|.|:..||..||||||.|.|:
Mosquito   423 KKKRKSRTAFTNHQIFELEKRFLYQKYLSPSDRDEIAAALGLSNAQVITWFQNRRAKLKR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 26/55 (47%)
LOC4576841XP_001230938.4 None

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