DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slou and Dr

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:702 Identity:167/702 - (23%)
Similarity:215/702 - (30%) Gaps:295/702 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TSPDVASADSVVSGTGGGSTPPAAKIP--KFIISANGAAVAGKQEQELRYSLERLKQMSSESGSL 101
            |||.|               ||::..|  ..||:::                      ||.||| 
  Fly    19 TSPTV---------------PPSSNTPAGNLIITSS----------------------SSNSGS- 45

  Fly   102 LSRLSPLQEDSQDKEKPNHNNNNSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAVR 166
                             |..:|.|..|..:::.|..|.|.||.                 |||  
  Fly    46 -----------------NSGSNMSSGNMTSSNLTNLSPSHPAG-----------------LNA-- 74

  Fly   167 HLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPH 231
             ||.|   ..|.|.||....|||         |||..|.|.|..|..|........||..| |.|
  Fly    75 -LASP---TSPSALLLAHQQHLL---------QQHQQHQQQQQQQQQAAALQLAAVHPPAH-HLH 125

  Fly   232 PHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAA 296
            ...|.:      |:.|.|.....|.|.:||...|.......|.....|.:...|:.||.....| 
  Fly   126 KTTSRL------SNFSVASLLADTRPRTPPNQAADGPQNLTSSAATSPISQASSTPPPPPASAA- 183

  Fly   297 PSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLG 361
                        |.|.|.|...::.:..|..                                  
  Fly   184 ------------AQVPANTFHPAAVAHHAHL---------------------------------- 202

  Fly   362 GLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAAN 426
             |.||.|||||.::..|.|...|   .::...|.........:.||||..|      :.|:..:.
  Fly   203 -LQAAHAAAAAHAQHQAMAAQLR---QQQQQADARANSPPASTSSTPSSTP------LGSALGSQ 257

  Fly   427 PSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEM--QERLDDD 489
            .:.|||.|.::|.:                          |.|.......|.||||  ....|.|
  Fly   258 GNVASTPAKNERHS--------------------------PLGSHTDSELEYDEEMLQDHEADHD 296

  Fly   490 QSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKS------------------- 535
            :.|| |..|:.||:.|         |.|.|..|     ..:|.|||                   
  Fly   297 EEED-SIVDIEDMNAD---------DSPRSTPD-----GLDGSGKSLESPHGPPPGSHMQSTILS 346

  Fly   536 -----------------------------GGG-----------------------GGGGSKP--- 545
                                         |||                       ||..::|   
  Fly   347 PAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAGFGGDANEPPRI 411

  Fly   546 ----------RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 600
                      |:.||.||.:||:|||.||:..:|||:.||...:.||.||||||||||||||.|.
  Fly   412 KCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKA 476

  Fly   601 KKQNPGMDVNSPTIPPPGGGSFGPGAYASGLLYSHAVPYPPYGPYFHPLGAH 652
            |:.... ::....:...|.|:  |||..:            ...||||...|
  Fly   477 KRLQEA-EIEKIKMAALGRGA--PGAQWA------------MAGYFHPSLMH 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 33/51 (65%)
DrNP_477324.1 Homeobox 424..477 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.970

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