DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and lbe

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:475 Identity:113/475 - (23%)
Similarity:155/475 - (32%) Gaps:174/475 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 PAHPHSHQHPHPHPHPHPHPHPSAV---------------------------------------F 238
            |.....|.|||.||||..||..|.:                                       |
  Fly    25 PLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAAASGLTRSAVGNLPEDYF 89

  Fly   239 H----LRAPSSSS------TAPPSPATSPLSPPTSPAM--------------HSDQQMSPPIAPP 279
            |    ||..||||      .:|||....|.:..|:.:.              ||::|....::||
  Fly    90 HPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPP 154

  Fly   280 QN----PPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISN 340
            .|    .|.:|:|      .|||.         ..:..||.......|.|:|....|...:...:
  Fly   155 PNANLLAPPASRP------IAPSG---------GLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWD 204

  Fly   341 SSSGS--------PSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGND 397
            ...|.        ||.  |..|..|:.|.           ..||:.....|::.....:.::...
  Fly   205 HLLGPTMPVRPFIPSA--LLHYEQRLALD-----------YHRQLQEHFNAQAQLLRHMGMNPAI 256

  Fly   398 EDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNK 462
            ..|.|||..          ||..||:    |:.||...|.|.|         |.:   .|.|   
  Fly   257 IASEDGSSE----------RSQRSSS----SNGSTECCSPRQA---------EKL---EKLT--- 292

  Fly   463 LPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQD----------DMCDDGSDIDDP 517
                        :.|..||.|::..::|... |.:...|...|          |...|.|.:|..
  Fly   293 ------------TQEGSEEAQKKKSEEQPTG-SGKSNGDTPLDALFQMTTKDFDESQDKSHLDIF 344

  Fly   518 SSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSL 582
            |:....|                   |.|::|||||..|:..||.:|...:|||..:|..:|.||
  Fly   345 SNRPQPK-------------------KKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASL 390

  Fly   583 SLTETQVKIWFQNRRTKWKK 602
            .|:..||..||||||.|.|:
  Fly   391 GLSNAQVITWFQNRRAKQKR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 27/55 (49%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)

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