DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and bap

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:357 Identity:92/357 - (25%)
Similarity:127/357 - (35%) Gaps:127/357 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 AAAAAAAAATSRQIAA-------ATYARSDTSEELNVDGNDE-----DSNDGSHS---TPSVCPV 413
            |..:||.|..|:.:..       .|.:..:|....:||...|     .|:|...|   :|.:|..
  Fly     7 AGVSAAMAGLSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCR 71

  Fly   414 DL-------TRSVNSSAAANPS------------------SASTSASSDRDAATKRLAFSVENIL 453
            ||       .:.:..| |..||                  :..||.||..|...::||:....:.
  Fly    72 DLGLYKLTQPKEIQPS-ARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLA 135

  Fly   454 DPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPS 518
            .|                                    .||.....||.|    ||....:....
  Fly   136 AP------------------------------------LDMRRCTSNDSD----CDSPPPLSSSP 160

  Fly   519 SETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLS 583
            ||:.....||            |.|:.:|:|.||::.|:..||.:|...||||..||..:|.||.
  Fly   161 SESPLSHDGS------------GLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLR 213

  Fly   584 LTETQVKIWFQNRRTKWKKQN--------PGMDVNSPT---IPPPGGGSF----GPGAYASGL-- 631
            ||||||||||||||.|.|::.        .|.....|.   :...|..::    .||| ..||  
  Fly   214 LTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGA-GHGLDP 277

  Fly   632 ----LYSH-------AVPYP----PYGPYFHP 648
                :|.|       .:|.|    |: |||:|
  Fly   278 ALINIYRHQLQLAYGGLPLPQMQMPF-PYFYP 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 32/55 (58%)
bapNP_732637.1 Homeodomain 176..232 CDD:459649 32/55 (58%)

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