DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slou and tin

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:592 Identity:138/592 - (23%)
Similarity:197/592 - (33%) Gaps:208/592 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LQEDSQDKEKPNHNNN-------NSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAV 165
            ||...|..:...:.::       .||||.:|.:.|      |.||..:  .:...|.:..| .:.
  Fly     2 LQHHQQQAQSGGYYDHYTQSPSPGSLTNADALNTT------PFSVKDI--LNMVNQTEAYE-GSY 57

  Fly   166 RHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHP 230
            .|:..........||...|:||            |:::|.|||..:.|. |....|       |.
  Fly    58 GHIDGAATASALFAAGEYQNPH------------QYLNHQQHQQSELPI-PQQQLH-------HQ 102

  Fly   231 HPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSD-QQMSPPIAPPQNPPHSSQPPQQQQV 294
            |....|.      :|||       .|||.||....::.. |....|....|:  |...|.|..|.
  Fly   103 HLDDGAT------TSSS-------LSPLLPPPPHQLYGGYQDYGMPAHMFQH--HHGHPHQSFQH 152

  Fly   295 AAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQ 359
            :|               :|....||...|.|||:...:.|:.:.:.:.||...|           
  Fly   153 SA---------------SAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYG----------- 191

  Fly   360 LGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAA 424
                .|..:|....|..|                            .||.|.| ..|..:||||.
  Fly   192 ----GATPSAVGIKSEYI----------------------------PTPYVTP-SPTLDLNSSAE 223

  Fly   425 ANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDD 489
            .:...|.|                            .||...|              :.:||.:.
  Fly   224 VDSLQAPT----------------------------QKLCVNP--------------LSQRLMET 246

  Fly   490 QSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNG-DGKSGGGGGGGS-KP---RRAR 549
            .|...|.:.:..      .|:|:...|.|..|.|:....:|. .|.|..|...|| ||   |:.|
  Fly   247 ASNSSSLRSIYG------SDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRKPR 305

  Fly   550 TAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK------------- 601
            ..|:..|::.||.:|:..:||:..||..:|..|:|:.|||||||||||.|.|             
  Fly   306 VLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHL 370

  Fly   602 --KQNPGMDVNSPT-IPPPGGGSFGPGAYASGLLYSHAVPYPPYGPYFHPLGAHHLSHSHSXNCK 663
              |..|   ::||| :|||              :.:| |.:||..........||          
  Fly   371 KLKSEP---LDSPTSLPPP--------------IPNH-VMWPPTMQQSQQQQQHH---------- 407

  Fly   664 MQQRLLQ 670
            .||:.:|
  Fly   408 AQQQQMQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 25/51 (49%)
tinNP_524433.1 HOX 301..357 CDD:197696 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.070

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