DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slou and ems

DIOPT Version :9

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:611 Identity:138/611 - (22%)
Similarity:187/611 - (30%) Gaps:238/611 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PPAAKIPKFIISANGAAVAGKQEQELRYSLERLKQMSSESGSLLSRLSPLQEDSQDKEKPNHNNN 123
            ||   :|    :|..|.:....:|::.:|:|.:.                            .|:
  Fly     6 PP---VP----TAAAAVMMPTPKQKIGFSIESIV----------------------------GND 35

  Fly   124 NSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLEL---NAVRHLARPE----PLQHPHAAL 181
            .|....|:..:....||||....:|..|.|......|.|   :...||..|.    |..||||. 
  Fly    36 VSTAGGNSTPDLSGPQSPPPGERNVPGSPPQTPPATLTLIPGSPPHHLMAPPAHGLPYPHPHAQ- 99

  Fly   182 LQQHPHLLQNPQ---FLAAAQQH-MHHHQHQHHQHPAHPHSHQ---------HPHPHPHPHPHPH 233
             |||   ||.|.   .|:.|||| :|.|.....|||..|.|||         |       |....
  Fly   100 -QQH---LQAPHPHPHLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLH-------HNAAM 153

  Fly   234 PSAVFHLRAPSSSSTAPPSPAT------SPLSPPTSPAMHSDQQMSPPIAPPQN-PPHSSQ---- 287
            .|.:..|:...|..|..|..|.      ||..|....|.:..|::.||..||:: .|.|||    
  Fly   154 ASGLSPLQTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSS 218

  Fly   288 -----------PPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNS 341
                       ||||||...|.:.....:................:.|.... .:......:...
  Fly   219 PTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPF-PMGPGGPPMPQG 282

  Fly   342 SSGSPSGRDLSDY-----------------------GFRIQLGG-LAAAAAAAAATSRQIAAATY 382
            ..|.|..:.|..|                       ...:|.|. |..|||||||......||.:
  Fly   283 QPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQF 347

  Fly   383 ARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDA-ATKRLA 446
                                                     ..||..|       ||: ......
  Fly   348 -----------------------------------------MPNPGMA-------RDSYQLYPWL 364

  Fly   447 FSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDG 511
            .|....:.|::|.|:.|.. ||                                           
  Fly   365 LSRHGRIFPHRFPGSFLVP-PF------------------------------------------- 385

  Fly   512 SDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERL 576
                                           .||:|.||||:..||:.||:.|::.:|:...||.
  Fly   386 -------------------------------RKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERK 419

  Fly   577 NLALSLSLTETQVKIWFQNRRTKWKK 602
            .||.:|:|:|||||:||||||||.|:
  Fly   420 ALAQNLNLSETQVKVWFQNRRTKHKR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeobox 549..601 CDD:278475 29/51 (57%)
emsNP_731868.1 Homeobox 392..444 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.070

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