Protein Alignment slou and Scr

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 518
• Identity: 118/518 - (22%)
• Similarity: 180/518 - (34%)
• Gaps: 180/518 - (34%)

  Fly   243 PSSSSTAPPSPATSP-LSPPTSPAMHSDQ-----QMSPPIA-----PPQNPPHSSQPPQQQQVAA 296
            |.::...|.:.|.:| |.|.|..|.:::|     |.:|.:.     .||......|..||||
  Fly    70 PGANDYFPAAAAYTPNLYPNTPQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQ--- 131

  Fly   297 PSDMDLERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSS----GSPSGRDLSDYGFR 357
                  :.....|||||:..|..:.............|:||...::.    |...|
  Fly   132 ------QHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQANISCKYANDPVTPGGSGG--------- 181

  Fly   358 IQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDL-TRSVNS 421
               ||::.:                         |.:.|..:||: ::|.....|.|| ||.:
  Fly   182 ---GGVSGS-------------------------NNNNNSANSNN-NNSQSLASPQDLSTRDI-- 215

  Fly   422 SAAANPSSA--STSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQE 484
            |...:|||.  |.:.|.::......||.:.......|..:|:.:..||
  Fly   216 SPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGP----------------- 263

  Fly   485 RLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGG---------- 539
                           .:::.......|.|.|   ||:||   |:..|..::.|.|
  Fly   264 ---------------GNVNVPMHSPGGGDSD---SESDS---GNEAGSSQNSGNGKKNPPQIYPW 307

  Fly   540 -----------GGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWF 593
                       ....:.:|.||::|..|.:.||.:|...|||:...|:.:|.:|.|||.|:||||
  Fly   308 MKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 372

  Fly   594 QNRRTKWKKQNPGMDVNSPTIPPPGGGSFGPGAYASGLLYSHAVPY--PPYG-PY----FHPLGA 651
            ||||.||||::....:|                         .|||  .||| ||    .||...
  Fly   373 QNRRMKWKKEHKMASMN-------------------------IVPYHMGPYGHPYHQFDIHPSQF 412

  Fly   652 HHLS-----HSHSXNCKMQQRLLQLFE-------------KRGRAVAGGA----GPAAGSGSV 692
            .|||     |..... ::.|...:.::             :.|..:.||:    |.|.|.||:
  Fly   413 AHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGPIGGGSVGVGGGAGGPGSL 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	28/55 (51%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	28/55 (51%)