Protein Alignment slou and bcd

DIOPT Version :10

• Sequence 1: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 517
• Identity: 91/517 - (17%)
• Similarity: 121/517 - (23%)
• Gaps: 292/517 - (56%)

  Fly   200 QHMHHHQHQH-HQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTS 263
            |:.:||...| |.|| |||||.|||.||||| |.||..
  Fly     8 QNFYHHPLPHTHTHP-HPHSHPHPHSHPHPH-HQHPQL--------------------------- 43

  Fly   264 PAMHSDQQMSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVAARTTQASSTSALASAS 328
                            |.||....|           .||
  Fly    44 ----------------QLPPQFRNP-----------FDL-------------------------- 55

  Fly   329 NSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQIAAATYARSDTSEELNV 393
                     :.:..:|:.:...:..|
  Fly    56 ---------LFDERTGAINYNYIRPY--------------------------------------- 72

  Fly   394 DGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKF 458
                         .|:..|                                         .|:.|
  Fly    73 -------------LPNQMP-----------------------------------------KPDVF 83

  Fly   459 TGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDS 523
            ...:||              |..:..|
  Fly    84 PSEELP--------------DSLVMRR-------------------------------------- 96

  Fly   524 KKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQ 588
                                 |||.||.||..|:..||..|...|||:.....:|:..|:|...|
  Fly    97 ---------------------PRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQ 140

  Fly   589 VKIWFQNRRTKWKKQ--------------NPGMDVNSPTIPPPGGGSFGPGAYASGLLYSHAVPY 639
            |||||:|||.:.|.|              :|||..:....|.....|.|.||..:.|..| ..|.
  Fly   141 VKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPS-PTPS 204

  Fly   640 PP-------YGPYFHPLGAHHLSHSHS-XNCKMQQRLLQLFEKRGRAVAGGAGPAAGSGSVD 693
            .|       |...|:....::..|:|: .|..|..:           ...|.||..||.:|:
  Fly   205 TPTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQ-----------YPSGGGPGPGSTNVN 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	25/55 (45%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	19/46 (41%)