DRSC/TRiP Functional Genomics Resources

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Protein Alignment slou and nkx1.2lb

DIOPT Version :10

Sequence 1:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_998713.1 Gene:nkx1.2lb / 407077 ZFINID:ZDB-GENE-040615-2 Length:373 Species:Danio rerio


Alignment Length:363 Identity:132/363 - (36%)
Similarity:166/363 - (45%) Gaps:106/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 RIQLGGLAAAAAAAAAT--------SRQIAAATYARSDTSEELN----VDGNDEDSNDGSHSTPS 409
            ::|:|...|.|.|....        .:::||.         ||.    |.|.|....:...::|.
Zfish     5 KVQVGDSVAPAGAGVIVVAPQDGMDDKRLAAG---------ELPVFNCVGGRDALPAESRETSPR 60

  Fly   410 VCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFT--------------- 459
            ..||        .|.|.|:...|:            :|||.:||||||||               
Zfish    61 HEPV--------PAGAPPTVHRTT------------SFSVLDILDPNKFTSKRQTPNRTGCEFAF 105

  Fly   460 GNKLPSGPFGHP-RQWSYERDEEMQE-----------RLDDDQSEDMSAQDLNDMD-QDDMCDDG 511
            |.:..|....|. ...||:.|.:.::           |.|:.:| |.:..:.:|.: |:|:|.:.
Zfish   106 GAENRSDDSNHTIEHKSYQEDYDCKKTSGILKDGFVFRSDECES-DFTRGNQSDSELQEDLCSEE 169

  Fly   512 S---------------DIDDPSSETDSK--KGGSRNGDG-------KSGGGGGGGSKPRRARTAF 552
            |               |.|..|...|.:  :..|.||..       |..|......|||||||||
Zfish   170 SSALTGNNDAEFGQHEDDDSISKSPDGQQTQQSSSNGQNHQVKPKRKRSGSDSKSGKPRRARTAF 234

  Fly   553 TYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSPTIPPP 617
            ||||||:||||||:||||||||||||||||||||||||||||||||||||||||.|.::||  ..
Zfish   235 TYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPT--SG 297

  Fly   618 GGGSFGPGAYASGLLYSHAVPYPPYGPYFHPLGAHHLS 655
            |||..||.....||  |...|.||.        :.|||
Zfish   298 GGGGNGPSNGLGGL--SPLSPSPPM--------SGHLS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 53/55 (96%)
nkx1.2lbNP_998713.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..74 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..231 20/82 (24%)
Homeodomain 228..284 CDD:459649 53/55 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..328 25/57 (44%)

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